Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1952 ATGGATGGTTTAGCTAGCAATCTTCCTCTAATTGTTATGGTAGGTCTGCAAATTCATTATGCAGCACTTGCCATATTCACAAGAGCCGCTCTGTTAGATGGATTGAGTACAACGGTCTTTGTTGTGTATAGGCAAGGCATAGCCACTTTGGCTTTGGCACCTATGTTTTTCTCTTCCAAGAGGAGACAATCAGTAAGAGATTCTTTGGGATTCAGGAGCTTCTTTTTGATGTTTGTGACGGCTCTTGTTGGAGTCACAGCAAATCAGAATGCATACTTTAAAGGTTTATTTTATGCATCTTCTACCGCAGCTACCGCTATGAGTAATCTGATACCAGCATTAACGTTTGTAATTGCAGCAATTGCGGGATTTGAGAAAATAGATATAAGCTTAAGAAGCACGGCGAAGATATTAGGGACTGTATGTTGCGTGACTGGAGCGTTAACCATGGCATTGGTAAAAGGACAGAAGCTGCTACACACGGAGTTCCTTCCTTCTGTGCATCTCACTGGCACTGAAGCTGATGATTGGCTTCTGGGTTGTCTATTGCTTTTAGCAAGCAGTGTTTTTTGGTCTTGTTGGATGATCCTCCAGGTACCAATCGCTTCGTGCTGCCCAGACCATTTGTTATCAACATTTTGGATGTGTCTGTTTTCAACAGTACAGGCAGCCCTATTTGCACTGCTCTCTGAGTCAGATCTTCAAGCATGGATTTTGCAATCACCTTTACAGATTTCGTGTTCTTTATATGCAGGAATCGGAATAGCAGTTAGCTTCTTCATTCAATCATGGTGCATCTCAGAAAGAGGTCCTTTGTACTGTGCAATGTTCAACCCTTTGGCAACAGTCATCACTGCTTTGATAAGTGCAGCATTCCTAGCGGAAGAGGTGTACGTTGGAAGTTTGATAGGGGCTGTTGGAGTTATTGCTGGTTTATATATTGTGCTATGGGGTAAAGCCAAAGAGTTTGCAGAGTTTAAACCAGAGGCGACACCACAATCATCAAACTTGCAAGATGATGATGATGATATAATAAGTAATGGGATAGATTTGGAACAACCCCTTCTATCAGAGAAATCTGAACATGTAACAGAAGAAGTAGATAGCAAGGTGTAG 1116 0.4194 MDGLASNLPLIVMVGLQIHYAALAIFTRAALLDGLSTTVFVVYRQGIATLALAPMFFSSKRRQSVRDSLGFRSFFLMFVTALVGVTANQNAYFKGLFYASSTAATAMSNLIPALTFVIAAIAGFEKIDISLRSTAKILGTVCCVTGALTMALVKGQKLLHTEFLPSVHLTGTEADDWLLGCLLLLASSVFWSCWMILQVPIASCCPDHLLSTFWMCLFSTVQAALFALLSESDLQAWILQSPLQISCSLYAGIGIAVSFFIQSWCISERGPLYCAMFNPLATVITALISAAFLAEEVYVGSLIGAVGVIAGLYIVLWGKAKEFAEFKPEATPQSSNLQDDDDDIISNGIDLEQPLLSEKSEHVTEEVDSKV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1952 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Aed6g1952 371 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020|GO:0016021
Aed6g1952 371 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Aed6g1952 371 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Aed6g1952 371 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Aed6g1952 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1952 Aed-Chr6 22487895 22490185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1952 1 369 Nodulin-like Gene Family AT4G30420 43.570 5.86e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1952 - - gmx:100816384 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1952 6 22487895 22490185 Aed6g1952 6 22487895 22490185 ECH