Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1922 ATGCAGCAGAGTGATCAAACGGTGTTGAGTTTGAGGCCCGGTGGTGGAAGAGGTAGCAGGTTCCTCGCTCCTCGATTCGACTCATCCTCCTCAACGTCCTCTGCTTCCCCTGCTTTTGGCTCCTCTTCCGCTGATCTTCCTCTCCTGCGTCCCCATGGTGGACCTCCCTCTGCTTTCTCTATCAAGGCTGGAGATTCACGGTTTGAGGGTCGCGAGCGTGTGCGATATACCAGGGAACAGCTGTTACATCTTAGAGAGGGTGTTGAGATCCTTGATGATGTCTTAAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAATTGGGCCCGCCCAGAAAACAATGTGCCCTCGCAGCAATTTCAAAATCGATACTCTGAGCCAGATAATCGTGACTGGCGTGGACGATCTGGCCAACTTTCTGGTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGGGAGTTTGTCAATACTAATCAGGTTAATCGTCAAGACCAACTGAATTCTCAGTTTTCAAGGGCACAAAACTCTTCTAACCAAGGGGGAGGACCTACTCCGACACTAGTTAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAACTCTCTCCGACAAGGAACGTGTCTTAAAGACAGTTAAAGGAATACTAAACAAGTTGACTCCGGAGAAATTTGATCTTCTGAAGGGTCAGTTGATTGATTCTGGCATTACATCAGCCGACATATTGAAGGAAGTTATTTCACTGATATTCGATAAGGCGGTGTTAGAGCCAACGTTTTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCAGGTGGGAAAGAAATCACCTTTAAGCGAATACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAACTTGAGGGAAGAACTGAGACAGATGACTGCCCCTGACCAGGAGATGGAGCGACGAGACAAGGAAAGACTTCTCAAGATTCGAACCCTTGGAAACATCCGTTTAATCGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGCAGGAGCTTTTAGGACCTCCTGACAGCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAATTTTTCATCACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGTATAAATGACATGTACTTTATCCGGTTGAAAGAATTAAGCACCAACCCCCAACTTGCACCACGGATGCGGTTTATGGTTCGGGATGTTATAGAATTGCGATCGAATAACTGGATTCCAAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAATAACCGTGTAGTTTCTGGTGTTCAAGCAAATACCAGCCCAGGAGGATTCCCAATTGCCCGACCTGGCACAGGTGGTTTGATGCCTGGGATGCCGGGGACCAGGAGGATGCCTGGGATGCCTGGAATTGATAATGACAATTGGGAGGTCCCTAGGACAAGATCAATGCCGAGAGGAGACATGTCAGGCATGCAAACTGGAGGGCGTGGCCAATCTCCTTTCCTTTCCAAGACATCTACTGTTAACTCAAAGTTACTACCTCAAGGTAGTGGTGGTACTATAAGCGGGAGAAGCAGTGCCCTGGTGCATGGAGGTGGTGCTCCTTCTGCTCATCCACCAGACCTTGGTGTTAGTGCTGAGCCCACACCTCAAATCCCTTCACCCATTAAAGCTGTTCCTGCCATATCCCCTGAGAAGCCACAACCTCCAGCTGCAAAAGTGAACACTGACGAACTAAAGCGTAAAACTGCCTCTCTTCTGGAAGAATATTTCAGTGTCCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAAGCTCCAACTTATTACCCAGAGTTTGTCAAGGAAGCCATTTCCCTTGCACTAGATAAGAGTCCGCCATGCGTCGAACCTGTTGCCAATCTCTTTGAGCATCTGTCCATCAAGAAGGTTCTTTCAGCCAGAGACATAGGGACTGGGTGCATGTCATTTGCTTCTCTGCTGGATGATATCGGCATAGATTTACCTAAAGCACCAAAGAATTTTGGTGAGATAATAGGGAAACTAGTTTTGGCAGGGGGTTTGGATTTTAAGGTGGTGAGAGAAATCCTCAAGAATGTGGAGGATGACCTGTTCCAGAAAACAATATTTACTTCTGCATTGCAGGTAATTAGCTCTTCTGCATCTGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGCCAGAGTCTGTTCAACTGA 2385 0.4662 MQQSDQTVLSLRPGGGRGSRFLAPRFDSSSSTSSASPAFGSSSADLPLLRPHGGPPSAFSIKAGDSRFEGRERVRYTREQLLHLREGVEILDDVLKIKQDIEAELFGEDQNWARPENNVPSQQFQNRYSEPDNRDWRGRSGQLSGNADERSWDNLKENREFVNTNQVNRQDQLNSQFSRAQNSSNQGGGPTPTLVKAEVPWSARRGTLSDKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKEVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRILLNICQEAFEGADNLREELRQMTAPDQEMERRDKERLLKIRTLGNIRLIGELLKQKMVPEKIVHHIVQQELLGPPDSKVCPAEENVEAICQFFITIGKQLDESPKSRRINDMYFIRLKELSTNPQLAPRMRFMVRDVIELRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNNRVVSGVQANTSPGGFPIARPGTGGLMPGMPGTRRMPGMPGIDNDNWEVPRTRSMPRGDMSGMQTGGRGQSPFLSKTSTVNSKLLPQGSGGTISGRSSALVHGGGAPSAHPPDLGVSAEPTPQIPSPIKAVPAISPEKPQPPAAKVNTDELKRKTASLLEEYFSVRLLDEALQCVEELKAPTYYPEFVKEAISLALDKSPPCVEPVANLFEHLSIKKVLSARDIGTGCMSFASLLDDIGIDLPKAPKNFGEIIGKLVLAGGLDFKVVREILKNVEDDLFQKTIFTSALQVISSSASGQAVLDSQASDIEACQSLFN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1922 794 SUPERFAMILY ARM repeat 624 782 IPR016024 -
Aed6g1922 794 MobiDBLite consensus disorder prediction 114 129 - -
Aed6g1922 794 Gene3D - 622 788 - -
Aed6g1922 794 ProSiteProfiles MI domain profile. 628 750 IPR003891 -
Aed6g1922 794 SUPERFAMILY ARM repeat 209 444 IPR016024 -
Aed6g1922 794 Pfam MIF4G domain 215 442 IPR003890 GO:0003723|GO:0005515
Aed6g1922 794 SMART ma3_7 629 741 IPR003891 -
Aed6g1922 794 SMART if4_15 215 442 IPR003890 GO:0003723|GO:0005515
Aed6g1922 794 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 793 - -
Aed6g1922 794 MobiDBLite consensus disorder prediction 532 624 - -
Aed6g1922 794 Gene3D - 206 443 - -
Aed6g1922 794 MobiDBLite consensus disorder prediction 542 574 - -
Aed6g1922 794 MobiDBLite consensus disorder prediction 1 63 - -
Aed6g1922 794 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 793 IPR045208 GO:0003743
Aed6g1922 794 MobiDBLite consensus disorder prediction 24 41 - -
Aed6g1922 794 Pfam MA3 domain 629 741 IPR003891 -
Aed6g1922 794 MobiDBLite consensus disorder prediction 112 152 - -
Aed6g1922 794 MobiDBLite consensus disorder prediction 603 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1922 Aed-Chr6 22278407 22284405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1922 1 792 Eukaryotic Initiation Factors Gene Family AT5G57870 65.327 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1922 K03260 - gmx:100781275 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1922 6 22278407 22284405 Aed6g1922 6 22278407 22284405 ECH