Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1918 ATGAGAGGCCAGATATATCTTGGCCTTTGTATGAAAGGCCAAGATATATTTATTTTATTAGTAACTGAACGAAACAGGAAACTCCACGTGGACCACGTTGGTTGTTTGACTCTGCATTTATACACACTGTTCCGATATCGATCGATAATTGAAGAAGCGGAAGAACACGCAGAGTGGAAGATGCCGACACGTTGTGAAATATGCTGCGAGATTATGATCGCGATCTTGATCCCACCACTCGGAGTTTGCTTTCGCCACGGTTGCTGCAGCGTTGAATTTATCATCTGCTTGCTCCTCACGATTCTAGGTTACATTCCTGGCATAATCTATGCTCTCTATGCCATTGTCTTCGTCGATCGTGACCAGTACTTTGATGAATACAGGCGTCCTCTCTATTCTTCACAATACTGA 411 0.4355 MRGQIYLGLCMKGQDIFILLVTERNRKLHVDHVGCLTLHLYTLFRYRSIIEEAEEHAEWKMPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIVFVDRDQYFDEYRRPLYSSQY 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1918 136 Pfam Proteolipid membrane potential modulator 69 116 IPR000612 GO:0016021
Aed6g1918 136 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 61 134 IPR000612 GO:0016021
Aed6g1918 136 PANTHER BNAA03G50460D PROTEIN 61 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1918 Aed-Chr6 22267006 22268134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1918 61 135 RCI2 Gene Family AT4G28088 80.000 2.28e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1918 - - gmx:100306426 157.147