Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1914 ATGATGGCATTCCAAAGCATGGCTCATAATATTTTCTTCATATTGTGCTTATTAATCTTTGCAATATTTTCATCCATTGTTGCTGTTGCTGTTGCTGTGCCAAAAGAGCAAGAAGAAGATCGAATCTCAGGTCTACCGGGGCAGCCACGTGTGGCATTCTCTCAGTTCTCTGGATATGTAACTGTGAACGAGCAACATGGACGAGCACTCTTTTACTGGCTCACTGAATCTCCCACTTCCCCGCAGAATAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGATGCTCATCAGTAGCATACGGGGCATCAGAGGAAATTGGGCCATTCCGTATAAACAAAACTGGCTCTTCTCTATATATCAACAAATATGCATGGAACAGAGATGCAAATATTCTCTTTCTTGAATCCCCTGCTGGGCATTACGTCCCCCAGTTGGCTAAGCAAATTCATGATTATAACAAAAATAATCCTCAAATTATTAATCTCAAAGGATTCATTGTGGGAAATGCCGTGACTGATAGCTACAATGATGGGATTGGAACTGTCACATATTGGTGGAGCCATTCTATGATATCTGATAAGTCATACAAATCTATCCTCAAGTACTGCAATTTCACAGCAGAAGAAACGTCTAAAAAATGTGATGATGTATATAGTTATGCGGTTAACTATGAATTTGGAAATATAGATCAGTATAGCATCTACACCCCAACATGCACAACATCACAAAACAACACTGTCAAGCACACACGATTCAAGAATCTTCATCTGATTTCAGGGTATGATCCGTGTACTGAAAATTATGCAGAGAAATACTATAACCTTCCAGAAGTACAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGATTCTGAAATTTCTGTGTTGTCCATATACAAAGAGTTAATTGCCGTGGGATTAAGAATATGGGTTTTTAGTGGGGATACAGATTCTGTAGTTCCAGTAACTGCCACAAGATTTTCTTTGAACCATCTTAACCTCAAAATCAGAACTCACTGGTATCCATGGTACTCGGGTGGACAGGTTGGTGGTTGGACAGAAATTTATGAAGGATTAACTTTTGCAACAGTACGAGGAGCTGGACATGAAGTACCATTGTTTCAGCCAAAGCGAGCTTATATTCTTTTCAACTCTTTTTTGGCTGGAAATGAACTACCCAAATATTGA 1239 0.3987 MMAFQSMAHNIFFILCLLIFAIFSSIVAVAVAVPKEQEEDRISGLPGQPRVAFSQFSGYVTVNEQHGRALFYWLTESPTSPQNKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYINKYAWNRDANILFLESPAGHYVPQLAKQIHDYNKNNPQIINLKGFIVGNAVTDSYNDGIGTVTYWWSHSMISDKSYKSILKYCNFTAEETSKKCDDVYSYAVNYEFGNIDQYSIYTPTCTTSQNNTVKHTRFKNLHLISGYDPCTENYAEKYYNLPEVQKAMHANVTNIPYKWTACSDVLLKNWKDSEISVLSIYKELIAVGLRIWVFSGDTDSVVPVTATRFSLNHLNLKIRTHWYPWYSGGQVGGWTEIYEGLTFATVRGAGHEVPLFQPKRAYILFNSFLAGNELPKY 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1914 412 Pfam Serine carboxypeptidase 136 405 IPR001563 GO:0004185|GO:0006508
Aed6g1914 412 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 140 IPR001563 GO:0004185|GO:0006508
Aed6g1914 412 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 139 411 IPR001563 GO:0004185|GO:0006508
Aed6g1914 412 SUPERFAMILY alpha/beta-Hydrolases 37 408 IPR029058 -
Aed6g1914 412 Gene3D - 265 302 - -
Aed6g1914 412 PANTHER SERINE CARBOXYPEPTIDASE 24 17 140 - -
Aed6g1914 412 PANTHER SERINE CARBOXYPEPTIDASE 24 139 411 - -
Aed6g1914 412 PRINTS Carboxypeptidase C serine protease (S10) family signature 376 389 IPR001563 GO:0004185|GO:0006508
Aed6g1914 412 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Aed6g1914 412 ProSitePatterns Serine carboxypeptidases, histidine active site. 376 393 IPR033124 GO:0004185
Aed6g1914 412 Gene3D - 312 406 - -
Aed6g1914 412 Gene3D alpha/beta hydrolase 139 252 IPR029058 -
Aed6g1914 412 Gene3D alpha/beta hydrolase 36 138 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1914 Aed-Chr6 22238811 22244229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1914 270 409 Calmodulin-binding Proteins AT2G22960 29.787 3.47e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1914 K16297 - gmx:100785391 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1914 6 22238811 22244229 Aed6g1914 6 22238811 22244229 ECH