Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1881 ATGGAATTTTTAGATGACCGAGGACTTTACTACTTGGGCTGCGCCTTGGCAGCTGAAGAGGTTGACAACGATGACAAAGAGGAACGATGGAAATTGTTAGTCATCATTTTTAGTGTGACTGCTACCTTAATTTTCATATTAGGTGTCACAATCTATTTTCAGAGGAAGAGTATATTCAAGAAATCAACTGGGACACTCATTAATGCCGCCAAACATTTTCGTGGTTATGTTCCTCCTGAATATGTTAAACAAGGCGTGTACTCCACTAAATCCGATGTCTACAGTTTCGGAGTCCTACTTCTACAAATTATAAGTGGTAAGAAGACACATGGCTTTTATGGAGAGAACGAAGATTTGAAGCTCTTGGAGTATGCTCATGAGTTGTGGAAAGAAGGAAAGGGTATGGAGTACTTCATGGATGATTCACTTGATGATACAGCTTCACCGTGTAAACTAATGAGATGCATGCAAATTGCTTTGTTGTGCGTCCAAGAACATGCATACGATAGGCCTTCCATGCTCGAGGTTTCTTCAATGTTGAGAAACGAAAATAATAAATCTCTTGCAGTCCCCAAAAAGCCAGCATTTTCAAAAGTGAAAGAGGAGGACGAAGAACAAATTGAGTCTCATCAACCTGATCTAGAAATTAGTATTTCGGTGGTCGACGAAGCAACCATAACCGAAATGGTGGCGAGATAG 699 0.4034 MEFLDDRGLYYLGCALAAEEVDNDDKEERWKLLVIIFSVTATLIFILGVTIYFQRKSIFKKSTGTLINAAKHFRGYVPPEYVKQGVYSTKSDVYSFGVLLLQIISGKKTHGFYGENEDLKLLEYAHELWKEGKGMEYFMDDSLDDTASPCKLMRCMQIALLCVQEHAYDRPSMLEVSSMLRNENNKSLAVPKKPAFSKVKEEDEEQIESHQPDLEISISVVDEATITEMVAR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1881 232 Pfam Protein tyrosine and serine/threonine kinase 74 179 IPR001245 GO:0004672|GO:0006468
Aed6g1881 232 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1881 232 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 75 222 - -
Aed6g1881 232 Gene3D Transferase(Phosphotransferase) domain 1 37 205 - -
Aed6g1881 232 SUPERFAMILY Protein kinase-like (PK-like) 72 180 IPR011009 -
Aed6g1881 232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 75 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1881 Aed-Chr6 21987037 21989145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1881 75 232 Receptor kinase-like Gene Family AT4G23150 35.849 2.69e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed6g1881 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1881 - - vun:114175226 221.09