Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1866 ATGGCGTTTGATCAAAATTCCGTTCCGTTGGATCTCCGTCCATTAAACATGGCCGCGTCGGTGGCGGAGGGGCCGATGAATTCATCGGCCACCGTCACTCCGCCGACTCCGAATACCATCGGAGAGCTTTTCTACCCGCCGTCGGCCTCCGCCGCCGCTACGTGGTGCGTCCGCCCCATTGCGCATCCCAACGTGAGCCATGCGGCGGCGTATGGGTTTAACTACGGCGGTTCCACTTTCGGCAACCGCGTTGTGGCTGGGACTGCTATGAATTTGGGAAAGTTGATTGGGTGTAATGGATTGGAGAAGGCCTGCAATGATGTGAATGGTTTTGGTGGTGTTAGGAGCAACAGAGTGGTTGGGAATGGCAGTGATCATGGTGGTGGCAGTGATGATTCGGCCTTGCCCCCGGGGAGGAAGGTGAAGTTTCTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTAGGGGGGCAAACGAGGATCATTAGTGTTAGGAGAGATGTGAGTTTCAATGATTTGGGGCAGAAGATGGTTGAGACTTATGGGCTGGCTGTGGTAATCAAGTATCAGCTTCCAGAGGAGGATCTTGATGCATTGGTGTCTGTGTCGTGTCATGATGATGTGGAGAATATGATGGAGGAGTATGAGAAATTGGTTGAGAGGTCTCCTGATGGTTCTGCAAAGTTGAGGGTTTTTCTGTTTTCTGCTTCGGAGAGTGAATGTTCTGGTGGTGGGGTGCAGTTTGGGGACGTGCAGGATACAGGCCAGAAATATTTTGATGCTGTGAATGGGATTGGTAATAACACAGAGGGGGTTGGGATCAAAAGGAAGGGGAGTGTTACAAGTGCTGCTTCAACCCAGAATTCGGATTTTAGTGGGGCTGAGACTCTTGATAGTTCAATTGTTGCTCAAGGGGATTCCACTGGGGTGCCCACGTCATCACCCAAGGAGAATGTGGCATCAGTTACTTCGTGTTCGGACACAACCTCTAGTTTTATGGTTTCGGATGCTGGTGCACCAGTTTACTTGGGTGGTGCTTATGCGGTTTCGTTGGCCATGCCTATGGCTAAGACTAGTCCTACCTCAACCCCTAGTCCTTATTTTCATAATGAGGTTGAGTTAGAGAAGTCTGTGCCTGCTACATTTTCCCAGAACCCCTTTGGATTGCAGCAATCTGGAACAGAAATTTCAACTCCATCACCTTATTTCCAGCCTTTTATTGATACTAGCCAGGAGGTTATGAATCATGCAGATTATGTCCATCTGTCTTCACCGATGGGGTTCCCAAATCATCAGCTTTTAGGAAAATCCGGGCCTGTCTATGTGCAACAGCAGTTTCATGATAATACCTCCGGTTTAGCATTCCATCATCAGGTCATCCCTGGGGTACAAAGGACAGTGGCTCAACCATCTTCTCATGTTGGTGTAAGACCGAATGTTATTCAACCACAACAGTTGAGGCAACGGCAGCAACATCTTTTGGATCAATACCTTGATGAAAATACAGCAGGGGTAAGGATTATCCAGCTTCCTGCGGAACGTAGCTACAACACATACCAGGTTCCAGTGAATCAAGTCCCACCTGTCATAGTTGGAGGCAATTATGGCTGGGTTCAGGTTCCTCCACAAGAGCGCGTTGTTGTCTCTGATGGATTATTACCTCAACAACAGGTAATGATCCCTGAGAAAATCCAGGACTGTTCTATGTGTCAGAGAAAACTACCTCATGCACATTCAGATCCAGTAGTTCCGGATCAGCACAGCAGTGGTGTAGGTCCTATTCCTGATCCAACCCCAAGTCACCATAGTTTCCCAACGGATGACAACATAAAAGCTCAAGCAGCAAATATGATTATGCCAATGGCGCCCTTGAAGGAAGGCATGGTTGAACAGGGGGCTGGGACCAGACCCGGGGTCGTTGGCAAATTGGAACCTCCTGATGGAGTGCATCATACTGAGACCAATGGGCTTGCTCATAATATTGAGCCACAGCCTGAAAGTGGGAGGAAACAATCTCCAAATGGCGAGCTCATGGGAACAACACCACTGTCTTATCTAGATGATGTTGGCAACCACCACATGATATCAGTTGAAAACTGGGTTAAACACGACGTGCTTATTAACAAATCTGTCAATAATCATATGCCTTTAGTTGAAGGAACATCTATTCAAACTTCAGAGTGTATGGTTCAAGAATCTCCAAAAGAATATACCAATGAGCTTACTGGGGTTGTTTCTAAATCAGATGCGATAGATAATTGGATTAGACAAGACCATCTAAAATCTATTGATGAAAGGATGGACATACCCAATTCTGAAGTTTATGAAAGTAATGATTACACTTTTCTGCCAGTTGATAGACCCAGTGGGAATGATAAATTAGATTACAACACTCAGCACTCTGTAGAGGAGGAGGTGATTCTAGATACCAACTTTGGGAGATCAAAACTGAGAGTTGATGTGAATCACAACAAGATGACAGGTGTGCTGCCTTGTTCCTCTATGGAAATTTCATACAGGCGCAATTCCAGTCCAGGGGAATGCAATGAGGCTGCACAACCCCCTTTTTGGGGCATTCCTGGCTCGAATCCTCACTCGAATATTGGAAACCCCCACAAGGGTGATGCAGCACCATCTTCACCATCCCCATCTGTTAGGTTTGGAGATGTGCAGGATACTAGGAACTCACTTTTCAGCAATCAGGATCCCTGGAATATACATCATGGTACCTTCTTTCCACCTGCTATACCTAGCAAAGCTGCTTTTAAGAAAGAAACCTATTCTTGTCAGGATCCCTTTGGTGAGAATCCAGGCAACTTTGAGGAACAAAATTTAGAAGCACAGTTGGATGATAGCCTCTACCAGTCATTCAAACATAATTTAACTTTAGAACATGTTCGGTCTGCCAAAGGTTCAGCAGAAGACCAACAACTTCAAGCTGTTGCAGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAACTCCTTCAAATTCTGACTTGCATTCCAGAGATGTTTCTTGTTGCGAAAACATTGAGGTTGTTCAAACCAATCTAATAAATGTAAAGTGTGGACATAAAACTCAGGATGTCAAGAGAAAGCAACTAGAAAAGGCAAATTTTGGTTTTCTGGCATCGAATGTTGGAAAATTACAGGTTATAAAGAATTGTGATCTTGAAGAACTGACAGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGCAAAATGGAGGGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTTGCTGGAAAGGCTTCAGAGCAAGAGCCCATGAGAAGTGACTTCTGGAATGAGGCAATCAAACTTGCTGACTTGCACCATCCAAACGTGGTAGCTTTCTACGGTGTCGTGCTTGATGGCCCTGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTTAATGGTTCTTTAAGAAATTCCTTGCAGATGAGTGAGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGACGTGGCCTTTGGCATGGAGTACCTGCATGGAAAAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCGATTTGCAAGGTTGGTGACTTGGGTCTGTCAAAAGTAAAATGTCAGACGCTGATCTCTGGTGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCCTATGGTATTGTGATGTGGGAACTCTTGACTGGAGAGGAGCCATATGCAGACTTGCACTATGGTGCTATCATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCTGTTCCCGAATCTTGTGATCCGGAATGGAGATTGTTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGACCTGTCTTCACTGAGATTGCCAATGAATTACGTTCTATGACCAAAATCTCTCCCAGAGGACAAAACTCTCCTAAAGGACAACAAAACCAATAG 4050 0.458 MAFDQNSVPLDLRPLNMAASVAEGPMNSSATVTPPTPNTIGELFYPPSASAAATWCVRPIAHPNVSHAAAYGFNYGGSTFGNRVVAGTAMNLGKLIGCNGLEKACNDVNGFGGVRSNRVVGNGSDHGGGSDDSALPPGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRRDVSFNDLGQKMVETYGLAVVIKYQLPEEDLDALVSVSCHDDVENMMEEYEKLVERSPDGSAKLRVFLFSASESECSGGGVQFGDVQDTGQKYFDAVNGIGNNTEGVGIKRKGSVTSAASTQNSDFSGAETLDSSIVAQGDSTGVPTSSPKENVASVTSCSDTTSSFMVSDAGAPVYLGGAYAVSLAMPMAKTSPTSTPSPYFHNEVELEKSVPATFSQNPFGLQQSGTEISTPSPYFQPFIDTSQEVMNHADYVHLSSPMGFPNHQLLGKSGPVYVQQQFHDNTSGLAFHHQVIPGVQRTVAQPSSHVGVRPNVIQPQQLRQRQQHLLDQYLDENTAGVRIIQLPAERSYNTYQVPVNQVPPVIVGGNYGWVQVPPQERVVVSDGLLPQQQVMIPEKIQDCSMCQRKLPHAHSDPVVPDQHSSGVGPIPDPTPSHHSFPTDDNIKAQAANMIMPMAPLKEGMVEQGAGTRPGVVGKLEPPDGVHHTETNGLAHNIEPQPESGRKQSPNGELMGTTPLSYLDDVGNHHMISVENWVKHDVLINKSVNNHMPLVEGTSIQTSECMVQESPKEYTNELTGVVSKSDAIDNWIRQDHLKSIDERMDIPNSEVYESNDYTFLPVDRPSGNDKLDYNTQHSVEEEVILDTNFGRSKLRVDVNHNKMTGVLPCSSMEISYRRNSSPGECNEAAQPPFWGIPGSNPHSNIGNPHKGDAAPSSPSPSVRFGDVQDTRNSLFSNQDPWNIHHGTFFPPAIPSKAAFKKETYSCQDPFGENPGNFEEQNLEAQLDDSLYQSFKHNLTLEHVRSAKGSAEDQQLQAVAENVAASVLHSRTPSNSDLHSRDVSCCENIEVVQTNLINVKCGHKTQDVKRKQLEKANFGFLASNVGKLQVIKNCDLEELTELGSGTFGTVYHAKWRGTDVAIKRITDRCFAGKASEQEPMRSDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNSLQMSERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSYGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWRLLMERCWSSEPSERPVFTEIANELRSMTKISPRGQNSPKGQQNQ 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1866 1349 PRINTS Tyrosine kinase catalytic domain signature 1300 1322 IPR001245 GO:0004672|GO:0006468
Aed6g1866 1349 PRINTS Tyrosine kinase catalytic domain signature 1185 1203 IPR001245 GO:0004672|GO:0006468
Aed6g1866 1349 PRINTS Tyrosine kinase catalytic domain signature 1148 1161 IPR001245 GO:0004672|GO:0006468
Aed6g1866 1349 PRINTS Tyrosine kinase catalytic domain signature 1256 1278 IPR001245 GO:0004672|GO:0006468
Aed6g1866 1349 SMART serkin_6 1066 1332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1866 1349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1191 1203 IPR008271 GO:0004672|GO:0006468
Aed6g1866 1349 MobiDBLite consensus disorder prediction 311 330 - -
Aed6g1866 1349 SUPERFAMILY CAD & PB1 domains 156 249 - -
Aed6g1866 1349 Pfam PB1 domain 160 243 IPR000270 GO:0005515
Aed6g1866 1349 ProSiteProfiles Protein kinase domain profile. 1066 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1866 1349 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 892 1335 - -
Aed6g1866 1349 MobiDBLite consensus disorder prediction 658 686 - -
Aed6g1866 1349 MobiDBLite consensus disorder prediction 583 612 - -
Aed6g1866 1349 Gene3D - 161 244 - -
Aed6g1866 1349 Gene3D Transferase(Phosphotransferase) domain 1 1154 1349 - -
Aed6g1866 1349 Gene3D Phosphorylase Kinase; domain 1 1059 1153 - -
Aed6g1866 1349 PANTHER SERINE-THREONINE PROTEIN KINASE 134 881 - -
Aed6g1866 1349 SMART PB1_new 155 244 IPR000270 GO:0005515
Aed6g1866 1349 Pfam Protein tyrosine and serine/threonine kinase 1069 1329 IPR001245 GO:0004672|GO:0006468
Aed6g1866 1349 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 134 881 - -
Aed6g1866 1349 SUPERFAMILY Protein kinase-like (PK-like) 1058 1327 IPR011009 -
Aed6g1866 1349 MobiDBLite consensus disorder prediction 869 893 - -
Aed6g1866 1349 CDD PB1_UP2 144 242 - -
Aed6g1866 1349 PANTHER SERINE-THREONINE PROTEIN KINASE 892 1335 - -
Aed6g1866 1349 ProSitePatterns Protein kinases ATP-binding region signature. 1072 1103 IPR017441 GO:0005524
Aed6g1866 1349 MobiDBLite consensus disorder prediction 665 686 - -
Aed6g1866 1349 CDD STKc_MAP3K-like 1072 1329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1866 Aed-Chr6 21854798 21861823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1866 64 624 MAP Kinase Kinase Kinase AT3G46920 37.809 4.14e-84 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aed6g1866 PK_Tyr_Ser-Thr 3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1866 - - gmx:100819234 2074.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1866 6 21854798 21861823 Aed6g1866 6 21854798 21861823 ECH
Aed6g1866 6 21854798 21861823 Aed4g1137 4 10813771 10823221 PCT