Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1855 ATGAAATTGAGCAGTCCAAAATCAAGTGGCTATATGGAAGCTGGTTGTTTCCAAGATATAGTGAGAGAGGGATACTCAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTCGTGGGGTGCTGTTACCATGAGAACGCAAAAAAGAATGAGAAGAATGTGTGCTGCTTGGATTGTTGCACCAGCATCTGCCCTCACTGCTTGCCCTCTCATCGCTTCCACAGGCTTCTTCAGGTTCGTCGTTACGTTTATCACGATGTTCTTAGGTTGGAAGATCTTCAGAAACTCATTGACTGCTCCAACGTTCAGGTATAA 321 0.4424 MKLSSPKSSGYMEAGCFQDIVREGYSKPAWLEALYTEKFFVGCCYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVLRLEDLQKLIDCSNVQV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1855 106 Pfam PLATZ transcription factor 82 105 IPR006734 -
Aed6g1855 106 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 24 106 - -
Aed6g1855 106 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 24 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1855 Aed-Chr6 21783950 21785874 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed6g1855 PLATZ 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1855 - - gmx:100785737 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1855 6 21783950 21785874 Aed6g1855 6 21783950 21785874 ECH