Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1790 ATGATGGCTCGATTAAGGAATGTGGCAATTCTTGTCCTAGTTGTTGTGGCTGCAGTGTTACTGCAGAGTACAGAAGCTAAAGATTACGAGGTAGGAGATACCACAGCTTGGACTAGTTTTCCTCCTGGTGGTGCTTCTTTCTATTCCAAATGGGCTGCAAATTTTACATTCAAAGTAAACGACACTCTAGTGTTCAACTTCGAATCTGGAAGCCACAGTGTGGTGGAACTTACCAAGGATAACTATGAAAAGTGTGAAGTTGATAACAACATAAAAGCCTTTAATAGAGGACCAGCTAGAGTCACCTTGGATCACTCAGGGGAATTCTACTATTCCTGCACCTTCTCAGGCCATTGCAGCAGTGGCCAAAAGCTAAGCATTAAGGTCACTGATTCTTCACCACCAGCACCACAGAAAGCTCCAGCTGAAGCTCCTTCGACTAATTCTCCTCCTTCACCTCAGAAAGCTCCAGCTGAAGCTCCTTCAACTTCTGCTCCTGCACCACTGAATGCTCCAACTGAAGGTCCTAATTCAGTTTCTCCTCCTTCAGGTTCCAATGAAGGAGCTCCATCATCACAAACGGAACCAACTGTAGCCTCTCCACCACAGGGCTCAGCCACATCTCTTGCTGCTACCTTCTCTCTGTTCCTCATCACCATTGCCATCAATTTTTTTTCTCTATTTTAG 687 0.4527 MMARLRNVAILVLVVVAAVLLQSTEAKDYEVGDTTAWTSFPPGGASFYSKWAANFTFKVNDTLVFNFESGSHSVVELTKDNYEKCEVDNNIKAFNRGPARVTLDHSGEFYYSCTFSGHCSSGQKLSIKVTDSSPPAPQKAPAEAPSTNSPPSPQKAPAEAPSTSAPAPLNAPTEGPNSVSPPSGSNEGAPSSQTEPTVASPPQGSATSLAATFSLFLITIAINFFSLF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1790 228 Gene3D - 26 141 IPR008972 -
Aed6g1790 228 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Aed6g1790 228 PANTHER BLUE COPPER PROTEIN 3 216 IPR039391 GO:0009055
Aed6g1790 228 MobiDBLite consensus disorder prediction 126 205 - -
Aed6g1790 228 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 3 216 - -
Aed6g1790 228 MobiDBLite consensus disorder prediction 138 157 - -
Aed6g1790 228 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Aed6g1790 228 SUPERFAMILY Cupredoxins 26 129 IPR008972 -
Aed6g1790 228 MobiDBLite consensus disorder prediction 166 205 - -
Aed6g1790 228 CDD Stellacyanin 27 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1790 Aed-Chr6 21313367 21314219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1790 1 194 Phytocyanin Superfamily AT5G53870 35.294 6.09e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1790 - - gsj:114392869 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1790 6 21313367 21314219 Aed6g1790 6 21313367 21314219 ECH