Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1781 ATGAAGAAGGTGAGGAGAAAAATCGGGAAGTATGAGGTGGGTCGAACTATTGGCGAAGGCACCTTCGCCAAAGTTAAGTTCGCTAGAAACTCCGAAACAGGTGAGAGCGTCGCTATTAAAATTAAAACTGAGATATCCATTATGAAGATTGTCAGGCATCCTAATATAGTTAGATTGCACGAGGTTTTGGCTAGCCAGACCAAGATCTACATAATCCTTGAATTTGTAATGGGAGGGGAACTATATGACAAAATTGTTCAGCAGGGAAAGCTTTCTGAAAATGAATCTAGGCGCTACTTTCAACAACTTATAGACGCTGTTGATCATTGTCATAGAAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAACCTTCTTCTTGATGCTTACGGAAATTTGAAGGTTTCCGACTTTGGATTGAGTGCATTGACTAAGCAGGGTGATGACCTTCTTCACACCACTTGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTCAGCAATAGAGGATATGATGGTGCAGTAGCTGATGTTTGGTCATGTGGAGTCATCCTATATGTTCTAATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTTCCAACACTGTATAGAAGGATCAATGCTGCAGAATTTGTTTGCCCATTCTGGTTTTCTTCTGACACAAAGTCATTCATACAAAAAATTCTGGATCCTAATCCTAAAACACGAGTAAAAATTGAAGAAATAAGGAGAGATCCATGGTTCCAGAAAAACTATTTTCCTGTCAAACTCAGGGAAGATGAGCAAGTGAATTTGGATGATGTTCAGGCAGTTTTTGATGATATTGAGGACCAATATGTTGCTGAACGGTCAGAAATTACTGAGGGAGGTCCTCTGATAATGAATGCATTTGAGATGATTGCCTTATCACAAGGGTTGAATCTTTCACCACTATTTGATAGGCATCAGGATTATGTAAAGCGGCAAACTCGTTTTGTCTCCCGTAAACCAGCTCAAGTTATAATTTCTTCTATCGAAGCTGTTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGCAATTACAAGCTGAGGCTTGAAGGCGTTTCTGCAAACAGGGTTGGACAACTTGCAGTGGTCTTGGAGGTGTTTGAAGTCGCACCATCCCTTTTCATGGTTGATGTTCGGAAGGCAGCTGGGGATACTTTTGACTACCACAAGTTTTACAAGAATTTTTGTGCCAAACTAGGAAACATAATTTGGAGACCAGCAGGGACTATGCCAAAATCTAATCTGCTTAAGGAAATGACTTTATAA 1296 0.412 MKKVRRKIGKYEVGRTIGEGTFAKVKFARNSETGESVAIKIKTEISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQGKLSENESRRYFQQLIDAVDHCHRKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGDDLLHTTCGTPNYVAPEVLSNRGYDGAVADVWSCGVILYVLMAGYLPFEEADLPTLYRRINAAEFVCPFWFSSDTKSFIQKILDPNPKTRVKIEEIRRDPWFQKNYFPVKLREDEQVNLDDVQAVFDDIEDQYVAERSEITEGGPLIMNAFEMIALSQGLNLSPLFDRHQDYVKRQTRFVSRKPAQVIISSIEAVAESMGLKVHSRNYKLRLEGVSANRVGQLAVVLEVFEVAPSLFMVDVRKAAGDTFDYHKFYKNFCAKLGNIIWRPAGTMPKSNLLKEMTL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1781 431 Pfam Protein kinase domain 11 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1781 431 ProSiteProfiles NAF domain profile. 290 314 IPR018451 GO:0007165
Aed6g1781 431 Pfam NAF domain 292 351 IPR004041 GO:0007165
Aed6g1781 431 CDD CIPK_C 296 406 - -
Aed6g1781 431 PANTHER - 4 427 - -
Aed6g1781 431 Coils Coil 259 279 - -
Aed6g1781 431 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 427 - -
Aed6g1781 431 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Aed6g1781 431 ProSiteProfiles Protein kinase domain profile. 11 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1781 431 Gene3D Kinase associated domain 1, KA1 295 415 - -
Aed6g1781 431 Gene3D Transferase(Phosphotransferase) domain 1 2 294 - -
Aed6g1781 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 115 127 IPR008271 GO:0004672|GO:0006468
Aed6g1781 431 SMART serkin_6 11 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1781 431 SUPERFAMILY Protein kinase-like (PK-like) 8 301 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1781 Aed-Chr6 21247577 21253060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1781 1 357 CBL-interacting serine-threonine protein kinases AT5G35410 69.624 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed6g1781 Pkinase 2.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1781 - - gmx:100811380 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1781 6 21247577 21253060 Aed6g1781 6 21247577 21253060 ECH