Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1774 ATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGGCAACGCCATTGGGGTTCATGGGTCTCTGAAATTCGCCACCCACTTCTGAAGAGAAGGGTGTGGCTAGGAACATTTGAAACGGCAGAAGAAGCTGCTAGAGCCTATGATCAAGCTGCGATTCTGATGAGTGGGAGAAATGCCAAGACCAATTTCCCAATAACTCAAACTCCAGAAGGTGATCCAAAGAGCACTACCAGCGAGGACACTCCCTCCACCACCTCGAAGGATTTGGAGGAAATCCTACATGCAAAGCTTCGAAAATGTGGGAAGGTACCTTCACCTTCTATGACATGTTTGAGGCTTGACACTGAGAACTCCCACATCGGAGTGTGGCAAAAGCGCGCTGGGAGGCGCTCTGATTCAAATTGGGTTATGACGGTTCAGCTTGGAAAGAATAAGAGTACTGCCAGTAACAACAATGATAGTAGCAGTAGTAGTTCTCTTTCGAATTCTTCTCTACCTTCTTCTTCTGGTCATCATCACCAGCATGAGTCTCCATCGTTGGGTATGGTGACAGGTCATCATCATCATCATCATGAAGAAGTGGTGAGAGGTGGAGAGATCGATGAAGAAGAGAGAATTGCCCTTCAGATGATAGAGGAACTCCTCAACGACAGAAACTGCCCTAGCCCATCATTTAACAACAACAACAACATTATTCAAGAAAGGGATGGCACTGATCATGACAACTTTTTCCTTTGA 735 0.4599 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSTTSEDTPSTTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGRRSDSNWVMTVQLGKNKSTASNNNDSSSSSSLSNSSLPSSSGHHHQHESPSLGMVTGHHHHHHEEVVRGGEIDEEERIALQMIEELLNDRNCPSPSFNNNNNIIQERDGTDHDNFFL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1774 244 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Aed6g1774 244 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Aed6g1774 244 MobiDBLite consensus disorder prediction 218 232 - -
Aed6g1774 244 MobiDBLite consensus disorder prediction 141 200 - -
Aed6g1774 244 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Aed6g1774 244 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Aed6g1774 244 MobiDBLite consensus disorder prediction 60 82 - -
Aed6g1774 244 MobiDBLite consensus disorder prediction 141 174 - -
Aed6g1774 244 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Aed6g1774 244 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Aed6g1774 244 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Aed6g1774 244 MobiDBLite consensus disorder prediction 181 200 - -
Aed6g1774 244 MobiDBLite consensus disorder prediction 60 85 - -
Aed6g1774 244 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 226 - -
Aed6g1774 244 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 226 - -
Aed6g1774 244 MobiDBLite consensus disorder prediction 216 244 - -
Aed6g1774 244 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1774 Aed-Chr6 21205133 21206149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1774 1 215 AP2-EREBP Transcription Factor Family AT1G15360 58.371 4.78e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed6g1774 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1774 - - gmx:100787517 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1774 6 21205133 21206149 Aed4g1799 4 22237880 22240343 ECH
Aed6g1774 6 21205133 21206149 Aed6g1147 6 16163823 16165495 ECH
Aed6g1774 6 21205133 21206149 Aed6g1774 6 21205133 21206149 ECH