Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1770 GTTAAATTTAGGAACAAAATAATTAAGATAAGCTCAATCATATATCGTAACATTCACTTTTGGCAAGAGACAAACCCTTATATAAGTGACACTAAGTGGTATACTATAAATGCCACTAGCAAGGGAGAGAGTGAACCATCAAATTCAAATATCAAGCTTGAAGTTGGCAATATACTAGTTTCTGTTTGCATTGTTGGTATGAAAATGGATTCCATAATGGGCTCCCTAATGATTTTAGTGATGACTTCCGCAGTAGAAGCCCAATTGAAAACTGGCTTTTATTCTACTTCATGTCCAAATGCTGAGGCAATCATACGGTCCACCGTTGTATCCCACTTCAACAAAGATCTAACCATTGCTAGTGGCCTGCTCAGGCTTCATTTCCATGATTGCTTTGTTCAGGTAAGCTATCTCAATCTCAAATCCTTCACTCACTTAAAGCCGCACGTGTATAAAAGGGGTGCACATACCATAGGCCAGACAGATTGCAGATTCTTCAGTTATCGTCTATACAATTTCACCGCAGCTGGTAGTGCTGATCCCACTATAAACATAGCTTTCTTAGCTCAACTTCAAGCACTTTGTCCAAAAACTGGAGATGGCTTGAGAAGGGTAGCACTGGACAAAGATAGTCCAGCCAAATTTGATGTTAGTTTCTTCAAGAATGTACGTGATGGTAATGGGGTTCTTGAGTCAGACCAGAGGTTGTGGGAAGATTCTGCTACTCAAAGTGTGGTGAAAAATTATGCTGGGAATGCCAGAGGGTTACTCGGATTGAGATTTGACTTTGAATTTCCAAAGGCCATGATTAAGATGAGTAGTATAGAGGTGAAGACTGGTACTGATGGAGAGATCAGAAAAGTGTGTTCAAAATTTAATTGA 882 0.3957 VKFRNKIIKISSIIYRNIHFWQETNPYISDTKWYTINATSKGESEPSNSNIKLEVGNILVSVCIVGMKMDSIMGSLMILVMTSAVEAQLKTGFYSTSCPNAEAIIRSTVVSHFNKDLTIASGLLRLHFHDCFVQVSYLNLKSFTHLKPHVYKRGAHTIGQTDCRFFSYRLYNFTAAGSADPTINIAFLAQLQALCPKTGDGLRRVALDKDSPAKFDVSFFKNVRDGNGVLESDQRLWEDSATQSVVKNYAGNARGLLGLRFDFEFPKAMIKMSSIEVKTGTDGEIRKVCSKFN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1770 293 ProSitePatterns Peroxidases active site signature. 120 131 IPR019794 GO:0004601
Aed6g1770 293 Gene3D Peroxidase, domain 2 150 272 - -
Aed6g1770 293 ProSiteProfiles Plant heme peroxidase family profile. 138 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 PANTHER PEROXIDASE 76 135 - -
Aed6g1770 293 PANTHER PEROXIDASE 152 291 - -
Aed6g1770 293 Gene3D - 273 293 - -
Aed6g1770 293 Pfam Peroxidase 154 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 PRINTS Haem peroxidase superfamily signature 208 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 PRINTS Haem peroxidase superfamily signature 120 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 PRINTS Plant peroxidase signature 122 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 PRINTS Plant peroxidase signature 98 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 ProSiteProfiles Plant heme peroxidase family profile. 88 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 SUPERFAMILY Heme-dependent peroxidases 88 293 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 Gene3D - 89 140 - -
Aed6g1770 293 PANTHER PEROXIDASE 25-RELATED 76 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1770 293 PANTHER PEROXIDASE 25-RELATED 152 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1770 Aed-Chr6 21184979 21186730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1770 154 293 Peroxidase AT2G41480 71.429 8.35e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1770 K00430 - gmx:100816487 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1770 6 21184979 21186730 Aed6g1770 6 21184979 21186730 ECH
Aed6g1770 6 21184979 21186730 Aed10g1304 10 14306699 14309137 PCT