Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1744 ATGTTACTTGCACCCACAATGAATACTACTACTACTGTCACTGCCATCACCACCACACAGCTAGATGAACCCGACTACGACAGCAGCTCCTCCTCGGTTACGGTACCGGAATCGAGCAAGAGCTGGATGACGAACTTGAGCTTCGGAAGCCGGCGCCGCCGGAGCTCAGTCTCCGTCTGCTCCTCGACCACGGAGTCTCCACACGCGAGGCCACACAAGGCGAACCAGGCTGCATGGGAGGCCATGCGGAGGCTTCGGCGGGACAAGGGGCAGGTGGGGCTGGACCACTTCCGGCTGATCCGGCGGCTGGGGAGCGGCGACATAGGGAACGTGTATCTCTGCCAGATAAGGAACCCCGTGGTGGGGCTGCCGCAGTGCTTCTATGCCATGAAAGTGGTGGACAGAGAGGCACTTGCTATAAGGAAGAAGCTGCAAAGAGCGGAGATGGAGAAGGAGATTCTTGCAATGCTTGATCATCCTTTCTTGCCTACTTTGTACACTGAGTTTGACGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGCCCCGGTGGAGACTTGTATGCTGCTCGCCAACGCCAACCCGGGAAGCGCTTTTCCATAGCATCCACCACGTTTTATGCGGCTGAGACGCTATTGGCAATAGAGTATCTTCACATGATGGGGATAGTGTACAGGGATTTGAAGCCGGAGAACGTGCTTGTGAGGGAAGATGGTCACATTATGCTATCAGATTTTGATCTATCGCTAAAATGTGACGTTGTCCCAAAGCTGTTAAGGAGCAAGACGAGATTGGAACGCAGCATCAAGAGTACAAAGAGATCCGTGCCAGCCTGCAGTGCCCCCATGCAGCCTGTGCTGTCATGTTTCTTGTCATCAAATAGCAAGAAAAAGAAAGCAGCGACAGTGACAACAGTTATAAGGGAAAATGTTGAAGTGGAAGAAAATGATCCTGAGCTGGTGGCTGAGCCCATTGATGCAAAGTCTAAGTCATTTGTGGGGACACATGAGTACTTGGCACCAGAAGTGATTCTGGGCCAAGGACATGGGAGTGCAGTGGATTGGTGGACATTTGGGGTGTTCTTGTATGAGATGTTATATGGTAGAACACCCTTCAAAGGTGAAAACAATGAGAAGACTCTGGTCAACATTTTGAAGCAGCCCTTGGCTTTCCCTAGAATTGCAGTTAGCACCAGCAAGGAGTTTGAAGAGATGGTCAAAGTTCAAGACCTCATAAGCAAGTTGTTAGTGAAGAATCCTAGTAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCTTTGATTAGATCAGTTAGGCCCCCTGAGGTCCCTAGTGAAATCAACAAAATTAGGACTAGTAGGGTTTTGCTACCAAAACTAAGCAAAACAGACAGGGATCAGCCTTATCAGCTAAGAACAAGAACTCCTCATTTTGAATACTTCTGA 1482 0.4939 MLLAPTMNTTTTVTAITTTQLDEPDYDSSSSSVTVPESSKSWMTNLSFGSRRRRSSVSVCSSTTESPHARPHKANQAAWEAMRRLRRDKGQVGLDHFRLIRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSIASTTFYAAETLLAIEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKSTKRSVPACSAPMQPVLSCFLSSNSKKKKAATVTTVIRENVEVEENDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLAFPRIAVSTSKEFEEMVKVQDLISKLLVKNPSKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPSEINKIRTSRVLLPKLSKTDRDQPYQLRTRTPHFEYF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1744 493 PANTHER FLIPPASE KINASE 1-RELATED 19 493 - -
Aed6g1744 493 Coils Coil 130 150 - -
Aed6g1744 493 ProSiteProfiles Protein kinase domain profile. 97 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1744 493 Gene3D Transferase(Phosphotransferase) domain 1 182 250 - -
Aed6g1744 493 CDD STKc_phototropin_like 95 456 - -
Aed6g1744 493 SUPERFAMILY Protein kinase-like (PK-like) 79 461 IPR011009 -
Aed6g1744 493 PANTHER PROTEIN KINASE PINOID 2 19 493 - -
Aed6g1744 493 Pfam Protein kinase domain 328 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1744 493 Pfam Protein kinase domain 98 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1744 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Aed6g1744 493 Gene3D Transferase(Phosphotransferase) domain 1 326 457 - -
Aed6g1744 493 SMART serkin_6 97 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1744 493 Gene3D Phosphorylase Kinase; domain 1 95 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1744 Aed-Chr6 21042214 21044308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1744 22 493 AGC Kinase Gene Family AT2G26700 57.685 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed6g1744 Pkinase 9.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1744 K08286 - gmx:100777988 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1744 6 21042214 21044308 Aed6g1744 6 21042214 21044308 ECH
Aed6g1744 6 21042214 21044308 Aed10g1235 10 12399530 12402374 PCT