Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1732 ATGTTGGTGTCCATGTCGACCGTGTGCGGCAAAGACGAGATTGAGTTGTCTAGAGATGGAAGCCACTACAGCCTCTCTACTGGAATACTTCCTTCTCTCGGCGCCAAAAGTAACCGCAGACTCAAGCTCAGACCCTTCATTGTATCGCCCTATGACCGCCGCTACAGGATATGGGAATCTTTCCTTGTTATTCTGGTAGTATACACTGCTTGGGTTTCTCCCTTTGAATTTGGATTCCTGAAGAAACCACAAGCACCCCTTTCCATAACCGATAACATTGTCAATGCATTTTTTTTCGTGGACATAGTTCTGACCTTCTTCGTGGCTTACATTGACAAAAGCTCCTATTTGATAGTGGATGACCGAAAACAAATTGCTTGGAAATATACAAGGACTTGGTTGGGCTTCGATGTCATCTCCATCATTCCCTCTGAGCTTGTACAAAAATTATCGCCTTCTCCTCTTCAATCTTACGGTCTATTCAACATGCTTAGGCTTTGGCGTCTTCGAAGAGTTAGTGCTATGTTTTCTAGCAGGCTTGAGAAGGACAAAAACTACAACTATTTTTGGGTTCGATGCGCTAAGCTCGTTGCTGTTACCCTCTTCGCTGTTCATTGTGCTGCATGTTTCTATTATCTTATTGCTGCACGTTATCATGATCCCAAAAAGACATGGATTGGTGCAACGATGGATAATTTCCTTGAACGCAGCTTGTGGTCAAGATATGTGACATCTATTTACTGGTCTATTACAACCTTAACAACTGTTGGTTATGGAGATTTGCATCCAGTGAATTCAAGGGAGATGACCTTTGACATCTTTTATATGCTCTTTAATCTGGGCTTAACAGCATATCTGATTGGTAATATGACCAACTTGGTTGTCCATGGCACAAGTAGAACCAGAAAATTTAGGGATACCATACAAGCTGCCTCAAATTTTGCCCAAAGGAACCAATTGCCTCCTCGGTTGCAAGACCAAATGCTTGCACACTTGTGTTTGAAGTATAGAACAGACTCAGAAGGGTTGCAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCTATCAGATCGAGCATTTCACATTATCTTTTCTATTCTCTGATTGATAAGGTCTACTTGTTTCACGGGGTTTCAAATGACTTGCTCTTTCAATTGGTGTCAGAGATGAAAGCTGAATATTTTCCACCCAAAGAAGATGTTATCTTGCAAAACGAAGCCCCCACTGACTTTTATATACTGGTCACTGGTGCAGTGGTTGTTGGAGAGGCCAAAACTGGTGATCTTTGTGGTGAGATTGGTGTGCTTTGTTATAAGCCACAGCTTTTCACAGTTAGAACAAAGCGACTAAGTCAGTTACTGAGGCTAAACCGTACCACGTTCTTGAATATTGTCCAGGCCAACGTGGGAGATGGTACCATAATAATGAACAATCTCCTTCAGCATTTGAAAGAGATCAACGATCCAATCATGGAGGGAGTTTTGGTAGATATTGAGAACATGTTAGCTCGTGGTAGGATGGACCTACCAGTGAGTGTGTGCTTTGCAGCAGCAAGAGGTGATGACTTGTTGCTACATCAATTGCTCAAACGAGGCATGGATCCAAATGAATCCGACAACAATCGAAGGACAGCTTTGCATGTAGCGGCAGCTCAAGGAAAAGAGAACTGTGTTTTGCTTCTGTTAGATTATGGGGCAGATCCCAACATTAGAGATTTGGAAGGTAATGTGCCACTATGGGAGGCTATTATGGGAGGACACGAGTCAATGAGCAAGCTATTATCAGAGAATGGAGCAAAGTTGAACTGCGGCGATGTGGGACTATTCGCATGCACTGCAGTTGAACAAAACAGCATCAACTTGCTGAAGGAAATAATGCGGTACGGAGGAGATATCACGCTTGCAAACACCACCAACAACACTGGGACCACAGCTTTGCACGTTGCAGTCTCTGAAGGAAACGTTGAGATTGTAAAGTTCCTTCTCAGTCACGGGGCTAGCATTGACAAGCCAGACAAGCATGGCTGGACCCCAAGAGATCTAGCAGATCAGCAGGCACATACTGAGATCAAAGCCATTTTTGACTCCATTGGGGATCAGCCTAAGGCTCAGTCCTCGGTCCCTATTCCCGAGAAGAACACCAAGATCAGGTACCTTGGTAGGTTCACTAGTGAGCCAACCATGCCTTTGCCATTGCCCCTTGATGGCTCCTTTCATGGCGGGAACCAGAGCCAGAGCCAAAGCCAGAGCCAGAGCCAGAGCCGGCCAAGGCGTCGGAGCAACAACTACCATAACTCGCTCTTTGGGATCATGTCAGCAGCACACAATGGAGATAAGGACCTGCTTTCAGCTGTTGACATGAATAATAATAATAATAATAACAACAGTAGTAGTAATAGTTGTAGTAATGCAGTTGGTCCAGCTAGGGTTATAATTTCTTGCCCTGAGAAGGGTGTGGTTGTTGGAAAGCTTGTTTTACTGCCTGGAACCTTTCAAGAGCTGGTTGAGATTGGAGCCAAAAAATTTGGCTTCTATCCTACCAAAGTTGTCTGCAAAGATGGAGGTGAAATTGAAGAAATAGAGGTGATTAGGGATGGTGACCATCTTGTTTTCCTTGGTGCTAGTGGGGTGCTAGATTCTAATTGTACAGCTCCACCACCACTAACCAATGGTGTCCACACATGTTAG 2688 0.4423 MLVSMSTVCGKDEIELSRDGSHYSLSTGILPSLGAKSNRRLKLRPFIVSPYDRRYRIWESFLVILVVYTAWVSPFEFGFLKKPQAPLSITDNIVNAFFFVDIVLTFFVAYIDKSSYLIVDDRKQIAWKYTRTWLGFDVISIIPSELVQKLSPSPLQSYGLFNMLRLWRLRRVSAMFSSRLEKDKNYNYFWVRCAKLVAVTLFAVHCAACFYYLIAARYHDPKKTWIGATMDNFLERSLWSRYVTSIYWSITTLTTVGYGDLHPVNSREMTFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNQLPPRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLIDKVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVVVGEAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKEINDPIMEGVLVDIENMLARGRMDLPVSVCFAAARGDDLLLHQLLKRGMDPNESDNNRRTALHVAAAQGKENCVLLLLDYGADPNIRDLEGNVPLWEAIMGGHESMSKLLSENGAKLNCGDVGLFACTAVEQNSINLLKEIMRYGGDITLANTTNNTGTTALHVAVSEGNVEIVKFLLSHGASIDKPDKHGWTPRDLADQQAHTEIKAIFDSIGDQPKAQSSVPIPEKNTKIRYLGRFTSEPTMPLPLPLDGSFHGGNQSQSQSQSQSQSRPRRRSNNYHNSLFGIMSAAHNGDKDLLSAVDMNNNNNNNNSSSNSCSNAVGPARVIISCPEKGVVVGKLVLLPGTFQELVEIGAKKFGFYPTKVVCKDGGEIEEIEVIRDGDHLVFLGASGVLDSNCTAPPPLTNGVHTC 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1732 895 PRINTS EAG/ELK/ERG potassium channel family signature 102 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed6g1732 895 PRINTS EAG/ELK/ERG potassium channel family signature 242 259 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed6g1732 895 PRINTS EAG/ELK/ERG potassium channel family signature 268 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed6g1732 895 PRINTS EAG/ELK/ERG potassium channel family signature 68 75 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed6g1732 895 PRINTS EAG/ELK/ERG potassium channel family signature 91 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed6g1732 895 PRINTS EAG/ELK/ERG potassium channel family signature 286 295 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed6g1732 895 ProSiteProfiles Ankyrin repeat region circular profile. 541 572 - -
Aed6g1732 895 MobiDBLite consensus disorder prediction 783 801 - -
Aed6g1732 895 Pfam Ankyrin repeats (3 copies) 515 604 IPR002110 GO:0005515
Aed6g1732 895 Pfam Ankyrin repeats (many copies) 635 682 IPR002110 GO:0005515
Aed6g1732 895 ProSiteProfiles Ankyrin repeat region circular profile. 641 673 - -
Aed6g1732 895 SUPERFAMILY cAMP-binding domain-like 299 483 IPR018490 -
Aed6g1732 895 Pfam KHA, dimerisation domain of potassium ion channel 809 871 IPR021789 -
Aed6g1732 895 PANTHER K+ TRANSPORTER 1-RELATED 3 874 - -
Aed6g1732 895 ProSiteProfiles KHA domain profile. 809 889 IPR021789 -
Aed6g1732 895 MobiDBLite consensus disorder prediction 729 763 - -
Aed6g1732 895 PANTHER POTASSIUM CHANNEL AKT1 3 874 IPR045319 GO:0005249|GO:0006813
Aed6g1732 895 ProSiteProfiles cAMP/cGMP binding motif profile. 374 465 IPR000595 -
Aed6g1732 895 SMART ANK_2a 574 603 IPR002110 GO:0005515
Aed6g1732 895 SMART ANK_2a 541 570 IPR002110 GO:0005515
Aed6g1732 895 SMART ANK_2a 641 670 IPR002110 GO:0005515
Aed6g1732 895 SMART ANK_2a 508 537 IPR002110 GO:0005515
Aed6g1732 895 SMART ANK_2a 605 634 IPR002110 GO:0005515
Aed6g1732 895 Gene3D - 509 695 IPR036770 -
Aed6g1732 895 MobiDBLite consensus disorder prediction 782 801 - -
Aed6g1732 895 SMART cnmp_10 374 480 IPR000595 -
Aed6g1732 895 SUPERFAMILY Ankyrin repeat 514 696 IPR036770 -
Aed6g1732 895 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Aed6g1732 895 MobiDBLite consensus disorder prediction 738 763 - -
Aed6g1732 895 SUPERFAMILY Voltage-gated potassium channels 50 295 - -
Aed6g1732 895 Gene3D Jelly Rolls 338 487 IPR014710 -
Aed6g1732 895 ProSiteProfiles Ankyrin repeat profile. 641 673 IPR002110 GO:0005515
Aed6g1732 895 Pfam Ion transport protein 56 301 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed6g1732 895 ProSiteProfiles Ankyrin repeat profile. 541 573 IPR002110 GO:0005515
Aed6g1732 895 Gene3D - 58 295 - -
Aed6g1732 895 CDD CAP_ED 374 468 IPR000595 -
Aed6g1732 895 Pfam Cyclic nucleotide-binding domain 394 467 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1732 Aed-Chr6 20953845 20960179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1732 15 871 Ion Channels AT2G25600 62.243 0.0 1084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1732 K21867 - gmx:100819491 1593.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1732 6 20953845 20960179 Aed6g1732 6 20953845 20960179 ECH