Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1726 ATGCGAAACCTTTGCTGGTTGAGAACTACCTTGGCAAGTGCAATGAAGGATCCAGTGGAGGATAATGTGAAATCTAGGAGGGCCCTGCAGAAGAAACCCAAAGATCTTAGAAGAAGAAGAAGAGAAACAGGACTTGACACACAAACACAATTGGTTTCCTCTGCTTGCAAAACCAAAAGTCTTGTGTTTCCTGCCAGGCCAGGCTACGGCCACCTCGGGACAAAGTGTCTCGTCAAAGCCAATCACTTCCTCGCAGATTTATCAGCATCTGACTTAACCCATTACAATGTTAAGATAACACCAGAGGTTACTTCTCGTAAAACAAACAAAGCCATCATAGCTAAGTTAGTGAGGCTTTACAGGAACACTGACTTGGGGATGAGGCTTCCTGTTTATGATGGAAGAGCAAATCTCTACACTGCTGGCTTGCTTCCTTTTGCATACAAAGACTTCACCATAATATTGAGCGAGGATAATAATGAGGGCACTGGTTCTACCAGGGAAAGAGAATTTGAAGTGGTGATCAAGTTTGCAGCTCGTGTTAGCATGCATCAGTTACGTGAGCTTCTGAGTGGGAAACAAGTGGACACACCACAAGAAGCGCTTACTGTCATTGACATTGTATTGAGGGAGATTGCGGCTCAGAGCTTCGTGTCAATTGGGAGGTTTCTCTATTCTCCGGATTTAAGAAAACCACAGCAGCTAGGTGGTGGCCTAGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCAACTCAAATGGGTTTGTCACTTAATATTGACATGTCATCAATGGCGTTTATTGAACCACTCCCTGTAATTGACTTTGTTGCTCAAGTTTTGGGAAAAGATGTGCTCTCAAAGCCATTGTCAGATGCAGATCGTGTCAAGCAGATTAAGAAAGCCTTAAGAGGTGTGAAAGTTGAAGTTACACATAGAGGAAGTTTTCGAAGGAAGTACAGGGTTACAGGATTGACATCACAGCCTACAAGGGAGCTTAACTTCCCTGTGGATGAGAAAATGAACATGAAATCAGTAGTTGATTACTTTCAAGAAATGTATGGATACACAATCATATATTCTCATCTACCCTGCCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCTATGGAGGCATGTAAGATAGTTGGGGGTCAGAGATATACAAAAGGGCTTAACGAAAAGCAAATAACTTCTCTGCTAAAGGTCTCATGCCAGAGACCACGTGAACAAGAGACAGATATTCTACAGCAGACAATTCACCAAAATGATTATGGGTATAATCCCTATGCAAAGGAGTTTGGTATCAGCATTGACAGCAAGCTTGCATCAGTTGAGGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCACGAGACTGGAAGGGAGAAAGAATACTTGCCACAAGTTGGTCAATGGAACATGATGAACAAGAAAGTTATTAACGGAAGCACTGTAAGATATTGGGCATGTATTAATTTCTCACGCAGTATCCAAGAAAGTACTGCTCGTGGGTTTTGCCAACAGTTGGTTCAAATGTGCCAAACCTCAGGCATGGAATTTAGTCAGGACCCTGTGATTCCTATATATTCAGCAAGACCTGATCTGGTAAAGAAAGCCTTGAAGTATGTACATTTTGCTGTACTAGATAAACTTGGAGGGAAAGAACTAGAGTTGCTGATTGCCATTCTTCCAGACAACAATGGCTCTCTGTATGGTGATCTCAAAAGAATCTGCGAAACAGATCTGGGGTTGATTTCTCAGTGTTGTCTTACAAAACACGTAATCAAGATCAATAGACAGTATTTGGCAAATGTGGCACTAAAGATCAATGTCAAGGTTGTAGCCTCCCAGGACTGGCCAGAAGTAACAAAGTACGCAGGATTGGTATGCGCTCAGCCTCATCGTGAGGAACTCATTCAAGATCTTTTTAAATGTTGGAAGGATCCTCATCACGGTGTAGTTTATGGTGGCATGATCAGGGAGCTTCTACTCTCTTTTAAGAAGGCAACCGGACAAAAACCACTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGTTGTATGAGCTTGATGCCATCCGTAAGGCTTGTGCATCTTTGGAACCTAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGGCATCACACTAGACTCTTCTCAAACAATCATGACGACAGAAATAGCACTGATAAGAGTGGGAATATCTTACCTGGCACTGTGGTGGATTCTAAGATCTGTCATCCTACGGAATTTGACTTCTATTTATGCAGTCATGCGGGAATTCAGGGTACAAGTAGACCAGCTCATTATCATGTTTTGTGGGACGAGAACAATTTCAGTGCTGATGAGATCCAATCTCTGACCAACAATTTGTGCTACACCTATGCAAGATGTACACGATCTGTTTCTGTAGTGCCTCCTGCGTACTATGCTCATTTGGCAGCTTACAGAGCTCGATTCTACATGGAACCTAATGTACATGACATTGCTAAATCTCGAGGCGAATCAGTTCGGCCACTACCAGCGCTCAAAGAGAAGGTCAAGAATGTAATGTTTTACTGTTGA 2604 0.427 MRNLCWLRTTLASAMKDPVEDNVKSRRALQKKPKDLRRRRRETGLDTQTQLVSSACKTKSLVFPARPGYGHLGTKCLVKANHFLADLSASDLTHYNVKITPEVTSRKTNKAIIAKLVRLYRNTDLGMRLPVYDGRANLYTAGLLPFAYKDFTIILSEDNNEGTGSTREREFEVVIKFAARVSMHQLRELLSGKQVDTPQEALTVIDIVLREIAAQSFVSIGRFLYSPDLRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQVLGKDVLSKPLSDADRVKQIKKALRGVKVEVTHRGSFRRKYRVTGLTSQPTRELNFPVDEKMNMKSVVDYFQEMYGYTIIYSHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQQTIHQNDYGYNPYAKEFGISIDSKLASVEARVLPAPWLKYHETGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSIQESTARGFCQQLVQMCQTSGMEFSQDPVIPIYSARPDLVKKALKYVHFAVLDKLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVIKINRQYLANVALKINVKVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPNVHDIAKSRGESVRPLPALKEKVKNVMFYC 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1726 867 ProSiteProfiles Piwi domain profile. 616 836 IPR003165 GO:0003676
Aed6g1726 867 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 615 866 - -
Aed6g1726 867 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 39 616 - -
Aed6g1726 867 Gene3D - 479 611 - -
Aed6g1726 867 ProSiteProfiles PAZ domain profile. 299 386 IPR003100 GO:0005515
Aed6g1726 867 CDD Piwi_ago-like 431 835 IPR045246 -
Aed6g1726 867 CDD PAZ_argonaute_like 270 385 - -
Aed6g1726 867 Gene3D paz domain 265 390 - -
Aed6g1726 867 SUPERFAMILY Ribonuclease H-like 550 836 IPR012337 -
Aed6g1726 867 Gene3D - 612 867 IPR036397 GO:0003676
Aed6g1726 867 Pfam Piwi domain 616 835 IPR003165 GO:0003676
Aed6g1726 867 Pfam Argonaute linker 2 domain 415 459 IPR032472 -
Aed6g1726 867 SMART PAZ_2_a_3 275 408 IPR003100 GO:0005515
Aed6g1726 867 PANTHER PROTEIN ARGONAUTE 10 615 866 - -
Aed6g1726 867 SMART Piwi_a_2 561 836 IPR003165 GO:0003676
Aed6g1726 867 MobiDBLite consensus disorder prediction 18 44 - -
Aed6g1726 867 Pfam Mid domain of argonaute 470 546 IPR032473 -
Aed6g1726 867 PANTHER PROTEIN ARGONAUTE 10 39 616 - -
Aed6g1726 867 Pfam PAZ domain 294 402 IPR003100 GO:0005515
Aed6g1726 867 SUPERFAMILY PAZ domain 266 427 IPR036085 GO:0005515
Aed6g1726 867 ProSiteProfiles Piwi domain profile. 561 615 IPR003165 GO:0003676
Aed6g1726 867 SMART DUF1785_2 218 270 IPR014811 -
Aed6g1726 867 Pfam N-terminal domain of argonaute 75 209 IPR032474 -
Aed6g1726 867 Pfam Argonaute linker 1 domain 219 268 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1726 Aed-Chr6 20900211 20906788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1726 63 867 Eukaryotic Initiation Factors Gene Family AT5G43810 70.684 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1726 K11593 - gmx:100798086 1551.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1726 6 20900211 20906788 Aed6g1726 6 20900211 20906788 ECH
Aed6g1726 6 20900211 20906788 Aed10g1214 10 11857557 11866657 PCT