Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1721 ATGCGACATTCCTCTCCGATCTTCTTCTTCGTTAATTCATTCTACCCAATGACGCTGCGGATTATTGTTCTGGTGTTGCTGCTGCAGCTGAGTTGCAGTATCCGAGTGAACTCGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCTTTCATCTCCCAAACCCCACACTCCAACCGTCTCCAATGGAACGCTTCCCAATCCGCATGCGACTGGGTTGGCGTGAAATGCGACGCGTCACGCTCCTTCGTGTACTCGCTCCGCTTACCCGCCGTCGGCCTCGTGGGTCGGGTCCCACCCGACACACTCGGCCGCCTGACCCAGCTTCGGATCCTCAGTCTCCGCTCCAACGGCCTCACCGGCGAGATCCCTTCCGATTTCTCCAATTTAACCTTCCTCCGCAGCCTCTACCTCCAGAAGAACCAATTCTCCGGCGAGTTCCCTCCGAGTCTGACTCGTCTCACTCGCTTGACTCGCTTGGATCTCTCCTCCAACAACCTCACCGGCCAAATCCCCTTCTCCGTCAACAACTTAACCCACCTCACTGGCCTCTTCTTAGAGCACAACTCCTTCTCTGGTAAAATCCCAAGCATCACAGTCAAGCTTATTGCCTTGAACGTTTCCAATAACAATCTCAACGGTTCCATCCCTCAGACACTGTCTAGGTTCCCGGAAGCCTCATTCGCCGGAAACATTGATCTCTGCGGACCGCCGTTGAAGGAGTGCAGCCCCTTCTTTCCGGCGCCGGCGCCGTCTCCGTCGGAAAATTCAAACCCGACACAGATTCATAAGAAGTCCAAAAAGCTCTCCACCGGCGCCATTGTCGCAATCGTGTTAGGGTCTATTCTCGCCTTGGCGTTGTTGCTGCTTCTTCTCTTGCTATGTCTCCGGCGACGGCAGAAGAGACAGCCCGCGAAGCCGGTGGCGGTAGCGCGTTCCGTCGGGGCGGTGGAGGCGGGGACGTCGTCGTCGAAGGATGATATCACCGGGGGTTCGACGGAGGCGGAGAGGAACAAGCTTGTTTTCTTCGAAGGGGGGATATACAGTTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCAGAGGTGTTGGGGAAGGGTAGCGTGGGGACTTCGTATAAGGCGGTGCTGGAAGAAGGAACCACCATGGTTGTGAAACGGCTCAAAGACGTTGTGGTGACCAAGAAAGAGTTCGAGACGCAAATGGAGGTACTGGGGAAGATTAAGCACGACAATGTCGTTCCTCTCAGAGCCTTTTACTTCTCCAAGGATGAGAAATTGCTCGTTTACGATTACATGTCCGCTGGGAGCTTGTCTGCGCTGCTACACGGGAGCAGAGGGTCTGGGCGAACGCCACTGGACTGGGACAGCCGTATGAGAGTAGCCATAGGAGTCGCAAGAGGGCTGGCATGCCTCCACGTGGCAGGCAAGGTGGTCCACGGCAACATCAAATCCTCCAACATCCTTCTCCGAGGGCCGGACCATGATGCCGCTGTTTCGGACTTCGGGCTCAACCCCCTGTTCGGAAACGGAGCCCCGTCGAACCGTGTGGCGGGCTACCGGGCACCGGAAGTAGTCGAAACCCGGAAGGTGAGCTTCAAGTCTGACGTATACAGCTTGGGAGTGTTGCTGCTGGAGCTTCTAACAGGAAAAGCACCGAACCAAGCCTCGCTCGGGGAAGAGGGAATTGATCTGCCAAGGTGGGTGCAGTCGGTTGTGCGTGAAGAGTGGACCGCGGAGGTGTTCGATGCGGAGCTGATGAGGTTCCATAACATCGAGGAGGAGATGGTTCAGCTGTTGCAAATAGCGATGGCGTGTGTCTCCGCTGTGCCTGATCAGAGACCCAACATGCAGGAGGTGGTGCGTATGATTGAAGACATTAGCCGTGGCGAGACCGATGATGGGTTGCGACAATCCTCCGATGACCCATCCAAAGGATCCGAGGGTCACACACCACCCCCGGAGTCAAGGACTCCACCTAGCTCACTCACACCTTAA 1992 0.5612 MRHSSPIFFFVNSFYPMTLRIIVLVLLLQLSCSIRVNSEPTQDKQALLAFISQTPHSNRLQWNASQSACDWVGVKCDASRSFVYSLRLPAVGLVGRVPPDTLGRLTQLRILSLRSNGLTGEIPSDFSNLTFLRSLYLQKNQFSGEFPPSLTRLTRLTRLDLSSNNLTGQIPFSVNNLTHLTGLFLEHNSFSGKIPSITVKLIALNVSNNNLNGSIPQTLSRFPEASFAGNIDLCGPPLKECSPFFPAPAPSPSENSNPTQIHKKSKKLSTGAIVAIVLGSILALALLLLLLLLCLRRRQKRQPAKPVAVARSVGAVEAGTSSSKDDITGGSTEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTMVVKRLKDVVVTKKEFETQMEVLGKIKHDNVVPLRAFYFSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDSRMRVAIGVARGLACLHVAGKVVHGNIKSSNILLRGPDHDAAVSDFGLNPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSAVPDQRPNMQEVVRMIEDISRGETDDGLRQSSDDPSKGSEGHTPPPESRTPPSSLTP 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1721 663 Gene3D Transferase(Phosphotransferase) domain 1 431 643 - -
Aed6g1721 663 ProSiteProfiles Protein kinase domain profile. 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1721 663 Pfam Leucine rich repeat N-terminal domain 41 77 IPR013210 -
Aed6g1721 663 Pfam Protein kinase domain 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1721 663 PANTHER OS05G0588300 PROTEIN 25 643 - -
Aed6g1721 663 SUPERFAMILY L domain-like 42 222 - -
Aed6g1721 663 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Aed6g1721 663 Pfam Leucine Rich Repeat 107 129 IPR001611 GO:0005515
Aed6g1721 663 SUPERFAMILY Protein kinase-like (PK-like) 360 624 IPR011009 -
Aed6g1721 663 MobiDBLite consensus disorder prediction 624 663 - -
Aed6g1721 663 Gene3D Ribonuclease Inhibitor 201 242 IPR032675 -
Aed6g1721 663 MobiDBLite consensus disorder prediction 624 642 - -
Aed6g1721 663 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Aed6g1721 663 PANTHER OS05G0480400 PROTEIN 25 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1721 Aed-Chr6 20872736 20877511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1721 6 643 Receptor kinase-like Gene Family AT5G58300 51.852 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed6g1721 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1721 - - gmx:100806857 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1721 6 20872736 20877511 Aed6g1721 6 20872736 20877511 ECH