Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1706 ATGTCATCAAGTGGAACAACCATTTGGAGCTATGAGGAAGAAAAAGCATTTGAGAATGCCATAGCTATGCATTGGATTGAGGAAGAGGCCTCAAAAGAGCAATGGGAGAAAATTGCTTCAGCAGTTCCAAGCAAAAGCATGGAAGAAGTGAAGCAACATTACCAGGTTCTAGTAGAGGATGTAAGTGCAATAGAGGCAGGTCACATATCATTCCCAAACTATGCTTCTGAGGAAACCACATCTTCAAATAAGGACTTCCATGGCTCTTCCAAGGCCACAAGCTCAGATAAAAGATCAAATTGTAATTATGGAAGTGGCTTTTCTGGGTTAGGACATGACTCCACCACTCATAGTAGTGGTAAAGGAGGCTTGGCAAGGTCATCAGAACAAGAAAGAAGAAAAGGAATTCCATGGACTGAGGAGGAGCACAGTGTGAACAATGGAGATGTGGCTAGTAACCAAGCACCAATCACAGGGCAACATGGTATTGGTAACACAATTTCTTCAAACACAATGGGTGTAGTAGGAGTAGGACAATCCATGAAGCATAGAGTTCAAGGTGGTCACATACCACCAGGTTTAGGCATGTATGGAACACCAGTTGGCCATCCTGTGGCTGCTCCTCCAGGTCACATGGCATCTGCAGTTGGCACTCCTGTCATGCTTCCACCTGGGCCCCACCCCCATCCTCATCCCCATCATCCTCATCCACCTTATGTTCTTCCTCTTGCTTATCCAATGGCACCTCCAACAATGCATCAATAA 765 0.4536 MSSSGTTIWSYEEEKAFENAIAMHWIEEEASKEQWEKIASAVPSKSMEEVKQHYQVLVEDVSAIEAGHISFPNYASEETTSSNKDFHGSSKATSSDKRSNCNYGSGFSGLGHDSTTHSSGKGGLARSSEQERRKGIPWTEEEHSVNNGDVASNQAPITGQHGIGNTISSNTMGVVGVGQSMKHRVQGGHIPPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPHPHPHHPHPPYVLPLAYPMAPPTMHQ 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1706 254 MobiDBLite consensus disorder prediction 75 125 - -
Aed6g1706 254 SMART sant 5 60 IPR001005 -
Aed6g1706 254 ProSiteProfiles SANT domain profile. 4 54 IPR017884 -
Aed6g1706 254 SUPERFAMILY Homeodomain-like 9 64 IPR009057 -
Aed6g1706 254 MobiDBLite consensus disorder prediction 75 165 - -
Aed6g1706 254 CDD SANT 9 58 IPR001005 -
Aed6g1706 254 ProSiteProfiles Myb-like domain profile. 9 58 IPR001005 -
Aed6g1706 254 PANTHER TRANSCRIPTION FACTOR KUA1 6 143 - -
Aed6g1706 254 MobiDBLite consensus disorder prediction 145 165 - -
Aed6g1706 254 Pfam Myb-like DNA-binding domain 9 57 IPR001005 -
Aed6g1706 254 PANTHER TRANSCRIPTION FACTOR KUA1 144 253 - -
Aed6g1706 254 PANTHER TRANSCRIPTION FACTOR MYBS1 144 253 - -
Aed6g1706 254 MobiDBLite consensus disorder prediction 126 140 - -
Aed6g1706 254 PANTHER TRANSCRIPTION FACTOR MYBS1 6 143 - -
Aed6g1706 254 Gene3D - 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1706 Aed-Chr6 20736931 20738524 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed6g1706 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1706 - - gmx:100812196 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1706 6 20736931 20738524 Aed6g1706 6 20736931 20738524 ECH