Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1702 ATGTATTCTTCAAATACCTCCCTCATCTGCAATGACCTAATCTCGTACCCTAACCAACCATCATCTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACTATTAATTCTTCTTCAAAAGAACAAACCAATTCTAATTACAATTACAATTACACCCTTCCTTCTCCACTTCCTCCTCCCCCTCCTTTGTCCTTTTTCCAATCTCCCTTTGACGAAAATATCTTCCTCGAACACCACCACCATGACTTGCTCCTACTTCACCACTCTCTAGCTCATGACTCTGGACTAGTACTAGCCAAAAACCTTGAAGTTGCGACGGAAATTGCGACGGTTCCTTGCTCGGGACAAGGCGAGGTAATCGTGACGGCAATGGAGCACGCTCCGAGGAAGAGATCCAGCAAGAGAGACCGCCACAGCAAGATCAACACCGCGCGAGGCCTCAGGGACCGGAGAATGAGGCTGTCTCTCGAGGTTGCGAAGCGGTTTTTCGGGCTGCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTGGAGTGGTTGCTAACCCAAGCAAAGGGTGAAATCAAACAACTTGCAAGGGAGAAAACAGGTGGTGGCGGTGCTAAGAGTGCATCATCAACTTCTGAATGCGAAGGTGTGTCTAGCTTGGACGAGGTTGTGGTGAGTGGAGTTAACAACGAAGAGCAAGAGAGGGAGACAACAACAACCAACACGAAGAGAAGAACAACAAGCAAGGTTTGTAGAAAGAGTGCATTCAATCCAATTGACAAGGAATCGAGGGAAAAGGCAAGAGAAAGAGCAAGGGAAAGAACAAGAGAGAAGATGAGAACTCGAAGAGTACTTGCTGTTGCTGATGCATCAAACCTGAACCGTTTGAGTTCTTGGAACCCCTTTGAAACGGTTGAAGACTCTGCGAATGTGCACCTTATTCCTGAGCCTGCAGAAGAACCAAGTTCTCACGCTTGCAAGGAGCATTTGGGAGTAGTGGACATGTCGCATGAAGATAGTTCTTTGTCGATCATCAACAAGACGTGGAGCCCAACCATGATGTTCAATTCTTTCAACAACTCAGGAATAATCCTTCAGGAACATCAATTTGCAGAATTCCATCAGTCCTTGGGGAAATCTTGGGAAGCCTACAACACTCACATCTAA 1158 0.4655 MYSSNTSLICNDLISYPNQPSSCFRPFSFESNPTINSSSKEQTNSNYNYNYTLPSPLPPPPPLSFFQSPFDENIFLEHHHHDLLLLHHSLAHDSGLVLAKNLEVATEIATVPCSGQGEVIVTAMEHAPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLTQAKGEIKQLAREKTGGGGAKSASSTSECEGVSSLDEVVVSGVNNEEQERETTTTNTKRRTTSKVCRKSAFNPIDKESREKARERARERTREKMRTRRVLAVADASNLNRLSSWNPFETVEDSANVHLIPEPAEEPSSHACKEHLGVVDMSHEDSSLSIINKTWSPTMMFNSFNNSGIILQEHQFAEFHQSLGKSWEAYNTHI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1702 385 MobiDBLite consensus disorder prediction 201 232 - -
Aed6g1702 385 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 339 IPR005333 GO:0003700
Aed6g1702 385 ProSiteProfiles TCP domain profile. 134 192 IPR017887 -
Aed6g1702 385 MobiDBLite consensus disorder prediction 252 275 - -
Aed6g1702 385 ProSiteProfiles R domain profile. 258 275 IPR017888 -
Aed6g1702 385 Pfam TCP family transcription factor 133 278 IPR017887 -
Aed6g1702 385 MobiDBLite consensus disorder prediction 193 275 - -
Aed6g1702 385 PANTHER TRANSCRIPTION FACTOR TCP18 40 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1702 Aed-Chr6 20693652 20695121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1702 130 272 TCP Transcription Factor Family AT3G18550 47.468 1.58e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed6g1702 TCP 5.5e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1702 - - gmx:100803669 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1194 10 11487905 11489597 Aed6g1702 6 20693652 20695121 ECH
Aed3g1085 3 8562606 8564739 Aed6g1702 6 20693652 20695121 ECH
Aed6g1702 6 20693652 20695121 Aed6g1702 6 20693652 20695121 ECH