Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1685 ATGGACATCGTCGGCAAATCGAAGGAGGATGCTTCGCTTCCTAAAGGTTTCCCCTCATCGCCCTCCTCTATTCGTGAATTTGATCGAGTAGTTACAACAATGACAAAAATTATTAAGGAGATGTTACCCCCAGATGTACGTGTTGCAAGAGATGCCCAAGATCTATTGATTGAGTGTTGTGTAGAGTTTATAAACCTCATATCGTCAGAATCCAATGAAGTCTGTAACAGAGAGGATAAACGGACAATTGCACCTGAGCATGTATTGAAGGCTCTACAGGTTCTTGGATTTGGTGAGTACATTGAAGAAGTTTATGCAGCATATGAACAGCACAAACTGGAAACCATGATGAAAGATGGACTGTCTGAGGGAGCACCTGCAGGGCTTGTTGATGGTCCTCTAAAGAAGCCCCCAGACCAATCATGTCTCCTGTCTAATGTGTCTCCCTTGGTAGAGAGACTGGTGGAAATGGACACTTTAAAGAGTGGTAAATGGAGCAGTGGAGCTGAGATGACTGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCTCGTGCTAGGATGAATGGTGGAGCCATTGCTTCCAAGCAGCCAGATGCTGACCAAACTTTAGATAGCTAA 630 0.4476 MDIVGKSKEDASLPKGFPSSPSSIREFDRVVTTMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKLETMMKDGLSEGAPAGLVDGPLKKPPDQSCLLSNVSPLVERLVEMDTLKSGKWSSGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPDADQTLDS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1685 209 PANTHER PROTEIN DR1 HOMOLOG 155 208 IPR044255 -
Aed6g1685 209 PANTHER PROTEIN DR1 HOMOLOG 1 117 IPR044255 -
Aed6g1685 209 Gene3D Histone, subunit A 23 196 IPR009072 GO:0046982
Aed6g1685 209 SUPERFAMILY Histone-fold 33 195 IPR009072 GO:0046982
Aed6g1685 209 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g1685 209 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 92 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1685 Aed-Chr6 20572843 20576054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1685 1 206 CCAAT-DR1 Transcription Factor Family AT5G23090 62.136 1.85e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aed6g1685 CBFD_NFYB_HMF 6.7e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1685 K21751 - gmx:100807912 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1685 6 20572843 20576054 Aed6g1685 6 20572843 20576054 ECH