Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1683 ATGGCTGGGGGAAGAAGGAGGAGGCACCACTTTAGCAGAATCCATGCATTCACGTGTGGAAGGGCTTCTATGAAGGAGGAGCAGTCACTAATAGGAGGTCGTGGCTTCTCAAGGAAAGTGTATTGCAATGAACCTGAACGTGCAACAGCAAGTCTTGTCAATTATGGTGACAATTATGTGAGAACAACTAAGTATACATTGGCCACGTTCCTCCCAAAGTCCTTGTTTGAGCAATTCAGAAGGGTTGCGAATTTCTACTTCCTCGTTTGTGCAGTTTTGTCTTTCTTTCCTGTGTCTCCTTACTCAGGCGTCAGCAATGTTGTTCCTCTAGTGGTTGTGGTTGCTGCCACCATGGTCAAAGAGTTCATTGAAGATTTTACCAGGAAAAAACAGGATATAGAGATGAATAACAGAAAAGTTAAACTGCATCGTGGAGGTGGTGTTTTTGACTATTCTAAATGGAGGGATTTGAAAGTTGGAGATGTAGTGAGGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCATCAAACTATGATGACGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAGACAAATTTGAAACTGAAACAAGCACTGGAAGGAACTTCAAAGTTGCAAGAAGACTCAAACTTTCAAAACTTCAGGGCTGTCATCCAATGTGAAGATCCAAATGCAAGTTTGTACACATTTGTTGGTCGTATGGAGCTTGAGGATCAACAGTATCCTCTCATACCTCAACAGCTACTGCTTAGGGACTCTAAGCTGAGGAACACAGATTTTGTTTATGGTGTGGTAATATTTACTGGACATGATACAAAGGTTATGCAGAATGCAACAGATCCCCCATCCAAGAGAAGTAAAATTGAGAAAAGGATGGATAAGATTATCTACTGCCTCTTCTTTGCACTTATTTTGATTTCTTTCATTGGGTCCATATTCTTTGGGATTGCCACAGATGATGACATTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACAGAGATTTACTATGACCCAAATGAACCAGTAGCTGCAGCAATTCTGCATTTCTTCACAGCACTTATGTTGTATGGTTACTTGATTCCAATTTCCTTATATGTATCCATTGAAATTGTAAAGGTTCTTCAAAGCGTTTTCATCAACCAGGATGTGCACATGTATTATGAGGTAACTGACAAGCCAGCACACGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAGACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGACGAGGGGTTACAGAAGTTGAGAGAGCTCTATCTAGGAGACATGAATCACAGCCAGGCCAAGAGTTGAAAAGGATTGGTGATTCAAAGTCATCCATTAAAGGGTTTAACTTCATGGATGAAAGGATCATGAAGGGAAATTGGACCAAAGAACCCAATGCCAAAGTAATCCAGAACTTCCTACGGTTGCTGGCTGTTTGCCATACTGCAATACCTGAAGTTGATGAAGCAACTGGTAAGGTTTCATATGAAGCTGAATCACCTGATGAGGCAGCTTTTGTGATTGCAGCCAGGGAACTTGGGTTTGAATTTTATGAAAGGACACAAACAACTATTTCACTGCGTGAATTTGACCCCATATCACACCAGAAAATCGAAAGGTCCTACAAACTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAGAGGATGTCTGTAATTGTGAGAGATTCAGAGGGGAAGCTATTACTACTTAGCAAAGGCGCTGACAGTGTAATGTTTGAACGAATTGCGAAGAAGGGAAGGGATTTTGAAGAGAAGACAAAGCAGCACATTAATGAATATGCTGATTCTGGTTTGAGAACCTTGATACTTGCATATCGTGAACTTAATGAGGAAGAGTACAATCAATTTAATAAGGAGTTTACAAAGGCCAAGAACTTAGTAAGTGAAGACCAGGAGCAGATTGTTGAGGCGATAACACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGATGGGGCATTTAAGTCAAGTGTTCTTCGTCAACTAAGAGAGGCAAAGAAATTACTTTATACATCAGATGAAAACTATGAGGCCTTGGCCCTGATCATTGATGGGAAGTCTCTTACTTATGCACTAGAGGATGATGTAAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATCTGCTGCCGTTCATCTCCCAAGCAGAAAGCACTTCGATCAATAAGACACACAACAGTCGGATTCACGGCTCGTTTGGAAGCATCCAAACGCTTTGAAGCATCCAGAAGAGTTGAAGCATTCGACCGGTTCGATGGGTCGAATCATTCTGAAGCTTCCAAAAGACTTGGAGCATCCACACGTTCGGAAGGGAGGTCTGAGGACAGATAG 2496 0.4079 MAGGRRRRHHFSRIHAFTCGRASMKEEQSLIGGRGFSRKVYCNEPERATASLVNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLVVVVAATMVKEFIEDFTRKKQDIEMNNRKVKLHRGGGVFDYSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSNFQNFRAVIQCEDPNASLYTFVGRMELEDQQYPLIPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFALILISFIGSIFFGIATDDDIENGRMKRWYLRPDDTEIYYDPNEPVAAAILHFFTALMLYGYLIPISLYVSIEIVKVLQSVFINQDVHMYYEVTDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSRRHESQPGQELKRIGDSKSSIKGFNFMDERIMKGNWTKEPNAKVIQNFLRLLAVCHTAIPEVDEATGKVSYEAESPDEAAFVIAARELGFEFYERTQTTISLREFDPISHQKIERSYKLLNILEFSSARKRMSVIVRDSEGKLLLLSKGADSVMFERIAKKGRDFEEKTKQHINEYADSGLRTLILAYRELNEEEYNQFNKEFTKAKNLVSEDQEQIVEAITQNIEKDLILLGATAVEDKLQDGAFKSSVLRQLREAKKLLYTSDENYEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALRSIRHTTVGFTARLEASKRFEASRRVEAFDRFDGSNHSEASKRLGASTRSEGRSEDR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1683 831 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 704 - -
Aed6g1683 831 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 705 774 - -
Aed6g1683 831 Gene3D - 117 286 - -
Aed6g1683 831 SUPERFAMILY HAD-like 419 775 IPR036412 -
Aed6g1683 831 Gene3D - 433 699 IPR023299 GO:0000166
Aed6g1683 831 SUPERFAMILY Calcium ATPase, transduction domain A 139 285 IPR008250 -
Aed6g1683 831 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Aed6g1683 831 Pfam Cation transport ATPase (P-type) 524 617 - -
Aed6g1683 831 Gene3D - 706 778 IPR023214 -
Aed6g1683 831 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 704 - -
Aed6g1683 831 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 705 774 - -
Aed6g1683 831 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 483 694 IPR023299 GO:0000166
Aed6g1683 831 CDD P-type_ATPase_APLT_Dnf-like 57 774 - -
Aed6g1683 831 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Aed6g1683 831 MobiDBLite consensus disorder prediction 808 831 - -
Aed6g1683 831 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 707 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed6g1683 831 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 508 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1683 Aed-Chr6 20546734 20552642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1683 10 774 Primary Pumps ATPases AT3G25610 62.440 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1683 K01530 K14802 gmx:100796405 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1177 10 11213799 11221219 Aed6g1683 6 20546734 20552642 ECH
Aed6g1683 6 20546734 20552642 Aed6g1683 6 20546734 20552642 ECH