Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1667 ATGGGGTGCTCATTCTCCGGTTTGAATGCCTTATACGACTCCGTGAACGGCGGAGGCGACGTGTGGATCAACGAGAACCGTTTCCGCGTCGTGCGCCAGCTCGGCGAAGGTGGCTTCGCCTTCGTCTACCTCGTCAAGGAGGCTCCCGGCGACGCTGCCACCGCTGGCCTCGCCGTCAAGCTTAAAGGCTCCTCTCATCTCTCCGATGACGGAACCTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAACAGCTGGAGTTGGTTAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCATCCCAATCTGCTTCCACTTCTTGATCATGCAATCATTTCTGTCAAGCAGCCTACCCCAGAAACATCTTGGAACCATGAAGCATACTTGTTGTTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAATAATGAAAGACAAGAAGGAATTCTATTCCCTCTCAGATGTGCTTCAAATATTTCGTCAGCTTTGTGCAGGACTGAAGCACATGCACAGTTTTGATCCTCCTTATGCACATAATGATGTCAAACCTGGTAATGTTCTCGTAACACATAGAAAAGGACAATCACCTCTTGCCATACTGATGGATTTTGGCAGTTCTCGTCCTGCAAGGAAGCAAATTAGCTCCAGGTCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCAAGCTAATATAGATGAGAGGACTGACATTTGGTCACTAGGATGCACATTATATGGAATAATGTACGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCCATTGTAAATGCTCAGATCAAATGGCCAGCTGGACCTAAGCCTCCATATCCAGAAGCTCTTCATCAGTTTGTGTCGTGGATGCTTCAGCCACAGGCTGCTATGCGGCCACGGATAGATGATATCATCATCCATGTTGATAAGTTAGTTACCAAGTTCTCTCAATGA 1032 0.4767 MGCSFSGLNALYDSVNGGGDVWINENRFRVVRQLGEGGFAFVYLVKEAPGDAATAGLAVKLKGSSHLSDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKQPTPETSWNHEAYLLFPVHLDGTLLDNAKIMKDKKEFYSLSDVLQIFRQLCAGLKHMHSFDPPYAHNDVKPGNVLVTHRKGQSPLAILMDFGSSRPARKQISSRSEALQLQEWASEHCSAPFRAPELWDCPSQANIDERTDIWSLGCTLYGIMYGVSPFEYALGESGGSLQLAIVNAQIKWPAGPKPPYPEALHQFVSWMLQPQAAMRPRIDDIIIHVDKLVTKFSQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1667 343 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1667 343 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Aed6g1667 343 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1667 343 Pfam Protein kinase domain 66 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1667 343 CDD STKc_16 27 337 - -
Aed6g1667 343 ProSitePatterns Protein kinases ATP-binding region signature. 34 60 IPR017441 GO:0005524
Aed6g1667 343 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 1 342 - -
Aed6g1667 343 Gene3D Transferase(Phosphotransferase) domain 1 15 342 - -
Aed6g1667 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 342 - -
Aed6g1667 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1667 Aed-Chr6 20469340 20473637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1667 33 333 EF-hand Containing Proteins AT4G04710 24.919 1.34e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Aed6g1667 Pkinase 1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1667 K08856 - gmx:100803659 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1667 6 20469340 20473637 Aed6g1667 6 20469340 20473637 ECH