Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1647 ATGGGGTCTCTGTGGCTATCAACCGTTGGATCTGTTGTCCCCCGTGGTGGCTTCTTCGCCATCTTTTTGCTGCCACTGCTCTTGTGCACTACATTCACTTCTACAGAAGCCTATGATGCACTTGATCCAACTGCCAATATTACTATCAAATGGGATGTCATAAGCTGGACTCCAGACGGCTACATTGCTCCTGGATGGATACTAGGGTGGACATGGGCAAAAAAAGAAGTAATTTGGAATGTGTTGGGAGGCCAAACCACAGAGCAAGGCGATTGTTCAAGGTTTAAAGGGAACATCCCACATTGTTGTAAGAAGGACCCAACAGTGGTGGATTTGCTGCCGGGAACTCCTTACAACCAGCAGATTGCAAACTGTTGCACAGGAGGAGTCTTGACTTCATGGGCCCAGAACCCTGAAAATGCAGTAAGTTCATTTCAAGTTAGTGTTGGTTCAGCTGGAACAACTAACAAAACTGTCAAACTGCCAAAGAATTTTACCCTGAAAGCACCAGGGCCTGGTTATACTTGTGGCCCTGCCAAGATTGTGAAACCAACTAAATTTATCACCAAAGACAAGAGGAGAACCACTCAGGCCTTGATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAGAAGACCCCAACTTGCTGCGTTTCGCTCTCATCCTTCTATAACGATACAGTAGTAAGCTGCCCTACCTGCACCTGTGGTTGCCAAAACAAAACAGAACCTGGCAGCTGTGTAGATCCCAATTCCCCACATTTAGCTTCAGTTGTGTCACCACCAGGCAAAGCTATAAATACACCTCTGGTCCGGTGCACCAATCACATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTTCAATACAAAGAGTACTGGAGGGTGAAGATCACAATCACAAATTTCAACTACAGAATGAACTATTCACAATGGAACCTTGTTGTGCAGCACCCGAACTTTGATAATGTAACGCGAGTTTTCAGCTTTAATTTCAAGCCACTAGCACCTTATGTGGGCTTAACGGGACCCCTTGGGAATGTGCAGTCTGAGGTGTTATTCAGAAAGGACAAATCATCCTTCACATTTGATAAGGGATGGGCTTTCCCAAGAAGAATTTATTTCAATGGTGATAACTGTGTAATGCCACCTCCGGATGCATACCCATGGCTGCCAAATGCAAGTTCGAAACTAGTTTTCTCTTTGCTAAGTACAGTCTTAGAAACTTTGGTTTGTGTGGTAATGTTATTGACTTAA 1266 0.4479 MGSLWLSTVGSVVPRGGFFAIFLLPLLLCTTFTSTEAYDALDPTANITIKWDVISWTPDGYIAPGWILGWTWAKKEVIWNVLGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCTGGVLTSWAQNPENAVSSFQVSVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVSCPTCTCGCQNKTEPGSCVDPNSPHLASVVSPPGKAINTPLVRCTNHMCPIRVHWHVKLQYKEYWRVKITITNFNYRMNYSQWNLVVQHPNFDNVTRVFSFNFKPLAPYVGLTGPLGNVQSEVLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVLETLVCVVMLLT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1647 421 Pfam COBRA-like protein 63 209 IPR006918 GO:0010215|GO:0031225
Aed6g1647 421 PANTHER COBRA-LIKE PROTEIN 14 420 - -
Aed6g1647 421 PIRSF COBRA 10 421 IPR006918 GO:0010215|GO:0031225
Aed6g1647 421 PANTHER PROTEIN COBRA 14 420 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1647 Aed-Chr6 20336534 20339965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1647 19 418 COBRA Gene Family AT3G02210 66.820 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1647 - - gmx:100811581 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1647 6 20336534 20339965 Aed6g1647 6 20336534 20339965 ECH