Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1645 ATGAACGGCTTAAGAAGTGAACGTGCCCCTCTCTTGGAAGCTGAGCGTAGCGGAAGAGGAAAGAGGGATGGTGCCTCGGAAGGTCAAGTCTCAGACCTTGAGCATGGTGATGCAGTGCCGGCAGCAAATGTGGGATTCTTTCGAGTGTTTTCACTTGCAAAACCTGAAGCTGGAAAGTTGATTATTGGTACCGTGGCTCTGTTGATTGCGGCCACATCAAGTATTTTAGTTCAAAAATTTGGTGGGAAGATAATTGACATTGTCTCAAGGGAAATGCAAACTCCAGAGGAGAAAGATGAAGCTTTGAATGCTGTTCAGAACACCATACTAGAAATCTCTCTGATTGTTGTCTTCGGTTCAATTTGCACTGCACTCCGAGCTTGGCTTTTTTATACTGCTAGTGAAAGGGTTGTTGCACGGCTTAGAAAAAATTTGTTCAGTCACCTTGTAAACCAGGAGATAGCCTTCTTTGATGTTACTCGAACTGGGGAACTTTTAAGTAGGCTATCTGAAGATACACAGATCATAAAGAATGCTGCAACTACCAATCTTTCTGAGGCCCTGAGAAACTTTTCAACTGCATTAATTGTGTTGGCTTTGGCTGTTGTACCTGTTCTTTCTGTTGCTGTTCGCAAGTTTGGCCGTTACCTGCGTGAACTTTCTCATAAAACTCAAGCTGCAGCTGCAGTAGCTTCATCAATAGCTGAGGAATCCTTTGGTGCAATAAGAACAGTAAGATCATTTGCCCAAGAAGATTATGAAATAACACGCTACTCAGAGAAAGTTAATGAAACACTTAATCTGGGTCTTAAACAAGCTAAAGTTGTTGGACTTTTTTCTGGAGGCCTTAATGCTGCATCTACACTTTCAGTAATTATAGTTGTTATATATGGAGCCAATTTGACAATCAAGGGTTCCATGTCCTCGGGTGATCTTACATCTTTCATTCTTTATAGTCTCTCAGTGGGTTCTTCTATATCTGGTCTGTCAGGATTGTATACAGTAGTTATGAAGGCTGCAGGTGCTAGTAGAAGGGTATTTCAACTTTTGGATCGTACCTCATCTATGCCTAAGTCTGGAGATAAATGTCCACTGGGTGATCAAGATGGGGAAGTAGAACTAGATGATGTTTGGTTTGCCTATCCATCACGCCCTAGTCACCCGGTGCTCAAGGGCATTACATTGAAACTGCAACCAGGATCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGAGTACAATTGCAAACTTAATTGAAAGATTTTATGACCCAACCGAGGGAAAGATTCTACTGAATGGGGTTCCTTTGGTAGAAATATCACACACGCATTTACACAGAAAGATCAGTATAGTGAGTCAGGAGCCTACACTCTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGGTTTGATGGCAAAGTGAATGAAGTTGATATAGAAAATGCCGCCAAAATGGCCAACGCCCATGAATTTATATCAAAATTCCCAGAAAAATACCAGACCTTTGTCGGAGAGCGTGGGGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCCCTGCTTATGGACCCAAAAATTCTCCTTTTGGATGAAGCCACCAGTGCCCTAGATGCTGAAAGTGAATATCTAGTGCAGGATGCCATGGAATCTCTCATGAAAGGAAGAACAGTTCTAGTCATTGCTCACAGGTTATCAACTGTTAAAACTGCCGACACTGTTGCGGTTATATCTGATGGCCAGGTAGTTGAGAGTGGCAACCATGAAGAGCTTCTCAGCAAGAATGGTGTCTATACTGCATTGGTCAAGAGACAACTGCAGACAACAAAAGCCGAAATCACTGTCTAG 1863 0.4267 MNGLRSERAPLLEAERSGRGKRDGASEGQVSDLEHGDAVPAANVGFFRVFSLAKPEAGKLIIGTVALLIAATSSILVQKFGGKIIDIVSREMQTPEEKDEALNAVQNTILEISLIVVFGSICTALRAWLFYTASERVVARLRKNLFSHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNFSTALIVLALAVVPVLSVAVRKFGRYLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAQEDYEITRYSEKVNETLNLGLKQAKVVGLFSGGLNAASTLSVIIVVIYGANLTIKGSMSSGDLTSFILYSLSVGSSISGLSGLYTVVMKAAGASRRVFQLLDRTSSMPKSGDKCPLGDQDGEVELDDVWFAYPSRPSHPVLKGITLKLQPGSKVALVGPSGGGKSTIANLIERFYDPTEGKILLNGVPLVEISHTHLHRKISIVSQEPTLFNCSIEENIAYGFDGKVNEVDIENAAKMANAHEFISKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMESLMKGRTVLVIAHRLSTVKTADTVAVISDGQVVESGNHEELLSKNGVYTALVKRQLQTTKAEITV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1645 620 Gene3D ABC transporter type 1, transmembrane domain 194 369 IPR036640 GO:0005524|GO:0016021
Aed6g1645 620 Gene3D ABC transporter type 1, transmembrane domain 17 193 IPR036640 GO:0005524|GO:0016021
Aed6g1645 620 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 338 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g1645 620 PIRSF ABC_prm/ATPase_B 9 619 - -
Aed6g1645 620 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 3 614 - -
Aed6g1645 620 CDD ABC_6TM_AtABCB27_like 63 346 - -
Aed6g1645 620 SMART AAA_5 399 593 IPR003593 -
Aed6g1645 620 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 609 IPR003439 GO:0005524
Aed6g1645 620 Gene3D - 370 615 IPR027417 -
Aed6g1645 620 MobiDBLite consensus disorder prediction 1 32 - -
Aed6g1645 620 Pfam ABC transporter transmembrane region 60 320 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g1645 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 610 IPR027417 -
Aed6g1645 620 MobiDBLite consensus disorder prediction 9 30 - -
Aed6g1645 620 ProSitePatterns ABC transporters family signature. 512 526 IPR017871 GO:0005524
Aed6g1645 620 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 614 IPR039421 -
Aed6g1645 620 SUPERFAMILY ABC transporter transmembrane region 48 352 IPR036640 GO:0005524|GO:0016021
Aed6g1645 620 CDD ABC_MTABC3_MDL1_MDL2 372 610 - -
Aed6g1645 620 Pfam ABC transporter 390 540 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1645 Aed-Chr6 20321177 20326840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1645 117 610 Calmodulin-binding Proteins AT2G36910 38.477 2.32e-96 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1645 - - gmx:100810510 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1645 6 20321177 20326840 Aed6g1645 6 20321177 20326840 ECH