Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1639 ATGATGAATAATGAAAGTTCAAGTAAAGCTCATGAACAAGAGGGTGATGATAGCATCAAAATTGAGAAACTTTCGTCAAAAACACCCTCTAGTACCTCATCAAGATCATGGTCAACATTCAGAAATCCAAGGATTGTTCGAGTGTCACGTTCCTTGGGAGGAAAAGATAGGCACAGCAAGGTTTGCACCATTAGGGGACTGAGGGACAGAAGGATTAGACTTTCTGTTCCCACAGCAATTCAGTTATATGATCTTCAAGACAAGCTTGGACTCAACCAACCTAGCAAGGTTGTAGATTGGTTGATTGAAGCCACCAAATCTGATATTGATAAGCTCCCACCTCTTCAATTTCCTCACTGTTTTGCTCATCAGTTCCATAACCAACAACAAACCCTACTGCCACCTGCTTCTGCTACCTCTCAGTTCTCTACTCTTGGAGCTTCTGGCTTCTATGATGCTCATGGGGGGAATCATCATCAAAACCTCATGGCAGCAACAAAGTCAAGGTATTGGGATATAAATTCACAACTAAATGGTAAAGAGTTAGCTGAAAATACTGTGTCAATCTCTCAAAAAGGCAAATACTGGATCAAAACAAATGAACAAGAAAATCATCATCAAGATGGAATTGATGGTGGTACTCATCATAATAGAGGAGATTCTTCTTCAGTTCATAATTATAAGCTCTTCCCCATTGGAACAACTAGTAACTACTCTTATTTACCTGGCTTGTTAAACAATGGCATCTTGGCACATAACTCCTACCACCATTCTGAGCCTTCAAGTCTATCTTTATCTCAATTTGGAAGCCATGGATTATTTTCAAGCAGTGGCAATGCTGTACCATTTTCATCTTCTAATTTCTCTGGAGCATCTGGTCCCCAATTACTTTTTTGTCCACCTTCTGCTACACCATCTGCTTTTAACTCAGTGGAAAGTGATCCAAGACAATCCAACAATAATGTTCAGATCTTCAGCTCAAGTTCCCAAGTCTTGATGCCTCATCCTCTCATCCAATCTCTTCATTCAGCTAATTCTCCTCTTAGACTCCTTCCAACATCATTTAACTCCAAGCTTCTTGATTCAGATGATAATCATGATAGTAGCCAAGCAAGTAAGGGTAATAATCATTCTTGA 1137 0.3967 MMNNESSSKAHEQEGDDSIKIEKLSSKTPSSTSSRSWSTFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVVDWLIEATKSDIDKLPPLQFPHCFAHQFHNQQQTLLPPASATSQFSTLGASGFYDAHGGNHHQNLMAATKSRYWDINSQLNGKELAENTVSISQKGKYWIKTNEQENHHQDGIDGGTHHNRGDSSSVHNYKLFPIGTTSNYSYLPGLLNNGILAHNSYHHSEPSSLSLSQFGSHGLFSSSGNAVPFSSSNFSGASGPQLLFCPPSATPSAFNSVESDPRQSNNNVQIFSSSSQVLMPHPLIQSLHSANSPLRLLPTSFNSKLLDSDDNHDSSQASKGNNHS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1639 378 MobiDBLite consensus disorder prediction 24 39 - -
Aed6g1639 378 MobiDBLite consensus disorder prediction 9 23 - -
Aed6g1639 378 Pfam TCP family transcription factor 54 170 IPR017887 -
Aed6g1639 378 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Aed6g1639 378 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 8 373 - -
Aed6g1639 378 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 373 IPR005333 GO:0003700
Aed6g1639 378 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1639 Aed-Chr6 20256178 20258562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1639 38 211 TCP Transcription Factor Family AT5G60970 48.901 1.07e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed6g1639 TCP 1.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1639 - - gmx:102665855 512.686