Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1625 ATGGCGTCGTCGGCGGCGGCGAAGCGATGCCACTACGAAGTCCTCGCCCTCCCCCGCGACTGCGCCCCCGACGAGATTCGGTCGGCCTACCGCCGTCTCGCCCTCCAGCGCCACCCCGACAAGCTCGTGAAATCAGGTCTCTCCGTAGAAGAAGCCACCGCGCAGTTCCAGGAACTCCAACACGCCTACGAAGTCCTCTCGGACCCGAAGGAACGCGCCTGGTACGACTCCCACCGCTCCCAAATCCTCTTCTCCGATCCCAACTCCGTCTCCAACAACAACTCCTTCGTCCCCGACCTCTTTTCCTTCTTCTCCAACACCGTCTTTTCCGGCTACTCCGACTCCGGTAAGGGCTTCTACAAAGTCTACGCCGACGTTTTCGACAAAATCCACGCTAACGAGATCAATTTCGCGCGCAAATTAGGGCTCGGAGTTGATTCCGTTAGACAGGCGCCTGTCATGGGGAATTTGGATAGCCCCTACGGTCAGGTCTCTGCGTTTTATAGCTACTGGTTAGGGTTTTGCACTGTCATGGATTTCTGCTGGGCTGATGAGTACGATGTTTTGGCGGGGCCGAATCGGAAGTCGCGGCGGCTTATGGAGGAGGAGAATAATAAGGTGAGGAGGAAGGCGAGGAGGGAGTTTAATGATACTGTGAGGAGGTTGGGGGATTTTGTGAAGAAGAGGGATAAGAGGGTGATTGATATGAAGATGAAGAAGAATTTGGAGGAGGAGAAGAAGAAGGAGGAGGAGAGGGAGAGGAAGAGGAGGTTGGAGAAGGAGAGGAAGGAGAGGGCTATGGCTTACGAGGAGCCGGAATGGGCCAAAGTTGAAGAAGAGGATGAGGTGGAGTTTGAGGAGGTGGAGGAGAGAAAGAATGAGAATGAGTTTTATTGTGTGCTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAACCATGAGCAGTCCAAGAAGCATAAGGAGAGGGTTGCCGAGTTCAAGGATTCGATTAGTGATGAGGAGGATCAGGTTGGGGTGAGTGATGAGACTGATAATGGGGTTGGTGATTTGGAGGAGGGGATTAGGGATGGCCTTAATGTTGAAGAGGGGAAGGAGACTAGAAATGAGGTTGAACTGAATGATGATGATGATGAGTTTTTTGATGCCTCCCTTGTGAAGGAAGGGGAAGAGGCTGATTTGCCGGTTAATTTTCGTGATGATGACACTGAAGATGATGATAATGATGAAAATGGTGTTCTTGAAGCAATGGTGGCTGGGCACAAGAACAGAAAACCACCCACTTCAACACACAAACCCAAGGCTTCAGTTGCACCATTACCAATTGAAATTGAGAATGATGATGAAAATGGTGTTCTTGAAGCAATGGTGGCTGGGCACAAGAACAGAAAACCACGTGCTTCAACAAACAAACCCAAGGCTTCAGTAGCCCCGTCACCAATTGAAAATGAAAATGATGATGAGGTTGGCCCTATGGAATACAACAACCGAAAGAGTGCAAGAAAGAAACGTGCAGCCAAGAAAGAGAAGGGTCGGAAAAATTGGGAAGAATCTCAGGGGGCTTCTGCCAGTGGCGATTATGAGAATATAAACAGCAATGGAAATGGTAATGCTCATGCAGAGGAGTCTTGTTCCCAACATTTTGTGGAAAATGAGGATAATGGTATAGAGAAAGAGCAGGCTGGGAGAGAGAAAAAGATTTGTAATCAACCGGCTGATAAAAAAGGAGCTAGCAAGGACACAAAAACCAAAGCAAAAGTTTCATCCAAAGGAAGAAAAGGAAAGGTGAGATCAAGGAATGTTGACAATGCTTGTGAGGCGTGTGGAGAGGAGTTTGATTCAAGGAACAAATTACATCAACATCTTGGTGAATCGGGGCATGCGACATTAAAAGGTCGATAA 1905 0.4877 MASSAAAKRCHYEVLALPRDCAPDEIRSAYRRLALQRHPDKLVKSGLSVEEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVSNNNSFVPDLFSFFSNTVFSGYSDSGKGFYKVYADVFDKIHANEINFARKLGLGVDSVRQAPVMGNLDSPYGQVSAFYSYWLGFCTVMDFCWADEYDVLAGPNRKSRRLMEEENNKVRRKARREFNDTVRRLGDFVKKRDKRVIDMKMKKNLEEEKKKEEERERKRRLEKERKERAMAYEEPEWAKVEEEDEVEFEEVEERKNENEFYCVLCGKKFKSEKQWKNHEQSKKHKERVAEFKDSISDEEDQVGVSDETDNGVGDLEEGIRDGLNVEEGKETRNEVELNDDDDEFFDASLVKEGEEADLPVNFRDDDTEDDDNDENGVLEAMVAGHKNRKPPTSTHKPKASVAPLPIEIENDDENGVLEAMVAGHKNRKPRASTNKPKASVAPSPIENENDDEVGPMEYNNRKSARKKRAAKKEKGRKNWEESQGASASGDYENINSNGNGNAHAEESCSQHFVENEDNGIEKEQAGREKKICNQPADKKGASKDTKTKAKVSSKGRKGKVRSRNVDNACEACGEEFDSRNKLHQHLGESGHATLKGR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1625 634 Pfam DnaJ domain 11 76 IPR001623 -
Aed6g1625 634 SUPERFAMILY Chaperone J-domain 7 82 IPR036869 -
Aed6g1625 634 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 446 634 IPR044648 -
Aed6g1625 634 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 4 449 IPR044648 -
Aed6g1625 634 SMART dnaj_3 9 71 IPR001623 -
Aed6g1625 634 SMART c2h2final6 604 628 IPR013087 -
Aed6g1625 634 SMART c2h2final6 297 321 IPR013087 -
Aed6g1625 634 ProSitePatterns Nt-dnaJ domain signature. 56 75 IPR018253 -
Aed6g1625 634 ProSiteProfiles Zinc finger C2H2 type domain profile. 297 326 IPR013087 -
Aed6g1625 634 MobiDBLite consensus disorder prediction 312 359 - -
Aed6g1625 634 Coils Coil 276 296 - -
Aed6g1625 634 MobiDBLite consensus disorder prediction 518 545 - -
Aed6g1625 634 PRINTS DnaJ domain signature 12 30 IPR001623 -
Aed6g1625 634 PRINTS DnaJ domain signature 51 71 IPR001623 -
Aed6g1625 634 PRINTS DnaJ domain signature 30 45 IPR001623 -
Aed6g1625 634 MobiDBLite consensus disorder prediction 312 336 - -
Aed6g1625 634 ProSiteProfiles Zinc finger C2H2 type domain profile. 604 633 IPR013087 -
Aed6g1625 634 SUPERFAMILY beta-beta-alpha zinc fingers 289 340 IPR036236 -
Aed6g1625 634 Coils Coil 233 268 - -
Aed6g1625 634 CDD DnaJ 10 68 IPR001623 -
Aed6g1625 634 Pfam Zinc-finger double-stranded RNA-binding 297 322 IPR022755 -
Aed6g1625 634 ProSitePatterns Zinc finger C2H2 type domain signature. 299 321 IPR013087 -
Aed6g1625 634 Coils Coil 318 338 - -
Aed6g1625 634 Gene3D DnaJ domain 1 95 IPR036869 -
Aed6g1625 634 MobiDBLite consensus disorder prediction 398 413 - -
Aed6g1625 634 MobiDBLite consensus disorder prediction 546 588 - -
Aed6g1625 634 ProSiteProfiles dnaJ domain profile. 10 79 IPR001623 -
Aed6g1625 634 ProSitePatterns Zinc finger C2H2 type domain signature. 606 628 IPR013087 -
Aed6g1625 634 MobiDBLite consensus disorder prediction 387 600 - -
Aed6g1625 634 SMART ZnF_U1_5 294 328 IPR003604 GO:0003676|GO:0008270
Aed6g1625 634 Gene3D Classic Zinc Finger 284 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1625 Aed-Chr6 20166587 20170737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1625 1 634 C2H2 Transcription Factor Family AT1G74250 48.240 1.52e-178 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed6g1625 DnaJ 2.7e-20 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1625 K09506 - gmx:100788305 909.057