Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1620 ATGTCTGCTTGGGTTATAGGCTTTGCTACTATTGTAGCAGCGATTCTTATTTACAGGCTTTTGAAGCTCATAACCGGGCCTTCAGCTTCATTACCACTGCCACCAGGGCCCAGGCCATGGCCTATCGTGGGTAACTTGCCTCACATGGGCCCTGCGCCGCACCAGGGCCTGGCATCCTTGGCTCAGACTCATGGCCCGCTCATGCACCTCCGGTTGGGTATCGTCGACATGGTGGTGGCGGCTTCCGCCTCCGTGGCGGAGCAGTTTTTGAAGGTTCATGATGCCAATTTCAGCAGCAGGCCATGTAACTCCAGAACCACATACTTGACCTATAACAAACAAGACCTTGTTTTTGCTCCCTATGGTCCACGGTGGAGATTCTTACGGAAACTAAGTACGGTTCACATGTTCTCTGCTAAGGCCATGAATGATTTTAGACAACTGCGACAGGAAGAGGCGGCAAGATTGGCATGTAATGTAGCAAGATCGGGTTCTCAAGCGGTGGACTTAAGACAATTGTTGAACGTATGTACCACAAACATACTGTCGAGGATAATGATAGGACGACGTATTTTCAACGACAACAGTAGTAGCTGTGATACAAGAGCGGATGAGTTTAAATCTATGGTGGTGGAGCTTATGGTATTGGGTGGAGTTTTCAATATCGGTGACTTCATTCCTTGGTTAGACTGGCTCGACCTTCAGGGAGTGAAACCTAGGACAAAGGATTTGCACCAGAGGTTTGATACGTTTTTAACCTCCATTCTTGAGGAACACAAGATGTCCAAGAATGAGAAGCATCATGACTTGTTGAGTATATTCTTGTCACTTAAAGAGACTCCTCAAGAAGGACACAAACTTATTGATCAGGAGATCAAAGCAATACTTGAGGACATGTTTACAGCTGGGACAGACACATCATCAAGCACGGTAGAGTGGACAATTGCAGAACTCATTAAGAATCCAAAAATTATGATCCAAATCCAACAAGAGTTGAACAATGTTGTGGGTCAAGATAAGCACGTGACTGAACTAGACTTGCCTAACCTTCCTTACTTGCAAGCTGTGGTGAAGGAAACATTACGCCTCCACCCACCAACCCCTCTTTCACTCCCACGTTTCGCTGAAGAAAGTTGTGAAATATTCGGTTATCACATCCCCAAAGGTGCAACTCTCTTGGTCAATGTTTGGGCCATAGGACGTGACCCTAAGGAATGGGTTGATCCATTAGAGTACAAGCCTGAAAGGTTCCTCCCTGGTGGTGAGAAGTTTGATGTTGATGTCAAGGGTAATAACTTTGAGCTTATACCCTTCGGTGCTGGGCGTAGAATATGTGTTGGTATGAGCTTTGGCCTAAAGGTAGTTCAACTACTCATTGCTACCCTAATCCATTCCTTTGATTGGGAGCTCGAGAATGGGTGTGATCCAAACAAGCTCAACATGGATGAAGCATATGGGATTACCCTCCAAAAAGCAATACCTCTTTCCGTCCATGCACGTCCTAGGCTCTCACAACATGTATATTCATCGTTATCATCTTTGTGA 1545 0.4589 MSAWVIGFATIVAAILIYRLLKLITGPSASLPLPPGPRPWPIVGNLPHMGPAPHQGLASLAQTHGPLMHLRLGIVDMVVAASASVAEQFLKVHDANFSSRPCNSRTTYLTYNKQDLVFAPYGPRWRFLRKLSTVHMFSAKAMNDFRQLRQEEAARLACNVARSGSQAVDLRQLLNVCTTNILSRIMIGRRIFNDNSSSCDTRADEFKSMVVELMVLGGVFNIGDFIPWLDWLDLQGVKPRTKDLHQRFDTFLTSILEEHKMSKNEKHHDLLSIFLSLKETPQEGHKLIDQEIKAILEDMFTAGTDTSSSTVEWTIAELIKNPKIMIQIQQELNNVVGQDKHVTELDLPNLPYLQAVVKETLRLHPPTPLSLPRFAEESCEIFGYHIPKGATLLVNVWAIGRDPKEWVDPLEYKPERFLPGGEKFDVDVKGNNFELIPFGAGRRICVGMSFGLKVVQLLIATLIHSFDWELENGCDPNKLNMDEAYGITLQKAIPLSVHARPRLSQHVYSSLSSL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1620 514 Pfam Cytochrome P450 34 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 500 - -
Aed6g1620 514 SUPERFAMILY Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Aed6g1620 514 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1620 514 PANTHER FLAVONOID 3'-MONOOXYGENASE 4 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1620 Aed-Chr6 20132825 20135383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1620 8 509 Cytochrome P450 AT5G07990 61.024 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1620 K05280 - gmx:100778531 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1688 10 21561290 21564120 Aed6g1620 6 20132825 20135383 PCT