Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1603 ATGTCAGAGCAGGAAACACATTCCTGTGGCTTATTCTTTTTCTTTTTTTTTTTCTTGATCCTTCTTTCAGGTAAAGTTGTTGTAGGAGAATCTTTGGACACTGACAAAGAGGTTCTGCTGAAGCTGAAATGGTACCTGGACAACAATGTTCGTGATGACAGAGGAAAGTACATATATTGGAACAGTAGCTCCAGTCCTTGTGAATGGAAAGGGATTTCATGCAGTGCTACATTAAGGAGGGTGGTTGGCATAGACCTTTCTAACAGTGACATCACCGGTAAGATATTCAAGAACTTCTCAAATCTCACTGAACTCACACACCTTGATCTCTCTAAGAACACGCTCTCTGGTGAAATTCCTGAGGACTTGAGGCACTGCCACAAGCTCCTGCATCTCAACCTATCACATAATATTCTTGAAGCGGAGCTGAACTTGACTGGGTTGACAAGCCTGCACACACTGGACTTGTCAAATAACAGATTCGATGGGGATATTGGGTTGAATTTCCCAGCCATTTGTGCCAATTTAGTCATTGCGAATGTCTCGGGTAATAATCTGACTGGTGAGATTGAAAACTGCTTTGATCAATGTCTCAAGTTGCAGTACTTGGATTTGAGCACCAACAATCTCACTGGAAGCATATGGATGAAGTTTGCAAGGCTCAAAGAGTTTTCTGTTGCGGAGAATCATCTAAGTGGGACTATTCCTTTGGAAGCTTTTCCTTTGAATTGTACCCTTGATGAACTAGACCTTTCACAAAATGGATTTGCTGGTGAGGCACCTAAGGGGGTTGCTAGCTGCAAGAATTTGACCATTCTGAATCTTTCTAGTAACAGCTTTACTGGGGCTATTCCCGTTGAAATAGGGTCCATTTCGGGGCTCAAAGCATTGTACTTGGGGAACAACAGCTTTTCAAAAGAGATTCCTGAGGCCCTTCTGAACTTGACCAATTTGTCCTTCTTGGATTTGAGCAGAAACCGATTTGGTGGGGACATACAAGAGATATTTGGGAAATTTAAGCAAGTAAGCTTTCTTCTATTGCATTCAAACAATTACACTGGAGGATTGAGAACCTCAGGAATTCTCACATTGCCAAACATTTGGAGGCTAGACCTAAGCTACAATGACTTTTCAGGTCCACTACCTATTGAGATTTCTCAAATGACAAGTCTGAAGTTTCTAATGTTATCCTACAACCAGTTCAATGGATCCATTCCACACGAGTTTGGAAACATGACTCAGCTCCAAGCTCTAGACCTTGCCTTCAACAACTTGAGTGGGCCTATACCTCCAAGCCTTGGAAACTTGAGCTCCCTCTTATGGTTGATGCTTGCGAACAATTCCTTAACGGGAGAAATCCCTCCAGAATTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTTGCCAACAATAAGCTCTATGGAAAGTTGCCTTCTGAACTGTCCCAAATTGGAAGGAATGCCACGACCACATTTGAATCAAATAGGCGAAACTATAAAATGGTTGCTGGATCTGGTGAATGCTTAGCAATGAGGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATAGCCTCTTAACCAGGAAAACTTGTAGAGAGCTTTGGGACAAGTTGCTCAAAGGATATGGTGTGTTCCAAATTTGCACACCAGGTGAAAAAATTCGTAGAACACAGATATCCGGGTATATTCAGGTAAGTTCTAACCAGCTCAGTGGTGAAATCCCTTCAGAGATTGGCACAATGGTGAACTTCAGCATGATGCACTTGGGGTTCAACAACTTCTCTGGGAAGTTCCCTCCAGAGATGGGAAGTATTCCCATTATGGTCCTAAACATCACAAGTAACCAGTTTTCAGGTGAAATCCCCGAAGAAATTAGCAACTTGAAGTGTTTGATGAATCTTGACTTGTCATACAACAATTTCTCAGGGACTTTTCCCACAAGTTTGAACAACTTGACAGAGCTTAGCAAGTTCAACATCTCATACAACCCCTTAATATCCGGTGTGGTCCCATCAACCGGGCAATTTGCTACCTTTGAGAAAGATTCATATTTAGGAAACCCCCTTTTGATCCTTCCCGAGTTCATTGATAACGTTTCCAATGATGAAAACACCACCTCTCCCAAAGAGCATAAAAAAAAGTCCACAAGACTCTATGTGTTTTTGGTGTTTATAGTTATAACACTGGTTTTTGGAGTATTTGGGCTTCTTACAACCCTAGTCTGTGTATCAGTGAAAAACCCTTCAGAGGAACCAAGATACCTCTTGAGGGATAGTATAAAACAGTGGCATGATTCCAGCAGCTCCGGATCATCATCATGGATGTCTGATGACAAAGTTAAGGTTATCCGTTTGAACAAAACAGCATTCACACATGCCGACATTCTTAAAGCAACTAGCAGCTTCTCAGAGGACAGAATAATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGATGGCAGACAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGACTCGAAGGAGAGAAAGAATTCAAGGCTGAAATGGAGGTTCTAAGTGGCCATGGCTTCGGTTGGCCTCACCCAAACCTTGTCACACTCTACGGTTGGTGCCTAAACGGTTCAGAGAAGATACTAATATATGAGTACATAGAAGGTGGAAGCTTGGAGGATAAAGTCACTGATAGAACACGTTTAACATGGAATAGGAGGCTAGAAGTGGCAATCGACGTGGCACGTGCACTAGTCTATTTGCACCACGAGTGCTACCCTTCTGTTGTGCACAGAGATGTGAAAGCCAGCAATGTGTTACTAGACAAAGATGGGAAGGCCAAGGTCACTGATTTTGGGCTTGCGAGAGTGGTCGATGTTGGGGACAGTCACGTGAGTACTATGGTGGCTGGGACAGTGGGTTATGTTGCACCAGAATACGGACACACGTGGCAGGCTACTACAAAAGGTGACGTATACAGTTTTGGGGTGTTGGTTATGGAGCTGGCAACAGCAAGAAGAGCAGTGGATGGTGGTGAAGAGTGTTTGGTGGAGTGGGCTAGGCGTGTTATGGGTTATGGACGACATCATCGTCGTTCTGTGCCGGTTTTGCTAATGGGTTCTGGGCTTGTTGGTGGGGCTGAGGAGATGGCTGAGTTGCTTAGGATTGGTGTCATGTGCACTGCTGATGCACCACAGGCTAGGCCCAACATGACGGAGGTTCTTGCTTTGCTCATTAAGATATATAGTCTCAAGGGGGAGGACTCAAGTTATGGACACTACCTTGTTTAG 3285 0.4377 MSEQETHSCGLFFFFFFFLILLSGKVVVGESLDTDKEVLLKLKWYLDNNVRDDRGKYIYWNSSSSPCEWKGISCSATLRRVVGIDLSNSDITGKIFKNFSNLTELTHLDLSKNTLSGEIPEDLRHCHKLLHLNLSHNILEAELNLTGLTSLHTLDLSNNRFDGDIGLNFPAICANLVIANVSGNNLTGEIENCFDQCLKLQYLDLSTNNLTGSIWMKFARLKEFSVAENHLSGTIPLEAFPLNCTLDELDLSQNGFAGEAPKGVASCKNLTILNLSSNSFTGAIPVEIGSISGLKALYLGNNSFSKEIPEALLNLTNLSFLDLSRNRFGGDIQEIFGKFKQVSFLLLHSNNYTGGLRTSGILTLPNIWRLDLSYNDFSGPLPIEISQMTSLKFLMLSYNQFNGSIPHEFGNMTQLQALDLAFNNLSGPIPPSLGNLSSLLWLMLANNSLTGEIPPELGNCSSLLWLNLANNKLYGKLPSELSQIGRNATTTFESNRRNYKMVAGSGECLAMRRWIPADYPPFSFVYSLLTRKTCRELWDKLLKGYGVFQICTPGEKIRRTQISGYIQVSSNQLSGEIPSEIGTMVNFSMMHLGFNNFSGKFPPEMGSIPIMVLNITSNQFSGEIPEEISNLKCLMNLDLSYNNFSGTFPTSLNNLTELSKFNISYNPLISGVVPSTGQFATFEKDSYLGNPLLILPEFIDNVSNDENTTSPKEHKKKSTRLYVFLVFIVITLVFGVFGLLTTLVCVSVKNPSEEPRYLLRDSIKQWHDSSSSGSSSWMSDDKVKVIRLNKTAFTHADILKATSSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILIYEYIEGGSLEDKVTDRTRLTWNRRLEVAIDVARALVYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLVMELATARRAVDGGEECLVEWARRVMGYGRHHRRSVPVLLMGSGLVGGAEEMAELLRIGVMCTADAPQARPNMTEVLALLIKIYSLKGEDSSYGHYLV 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1603 1094 SMART serkin_6 805 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1603 1094 CDD STKc_IRAK 811 1079 - -
Aed6g1603 1094 SUPERFAMILY L domain-like 566 694 - -
Aed6g1603 1094 Pfam Leucine rich repeat 84 137 IPR001611 GO:0005515
Aed6g1603 1094 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Aed6g1603 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Aed6g1603 1094 Pfam Protein kinase domain 806 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1603 1094 ProSiteProfiles Protein kinase domain profile. 805 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1603 1094 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1083 - -
Aed6g1603 1094 ProSitePatterns Protein kinases ATP-binding region signature. 811 834 IPR017441 GO:0005524
Aed6g1603 1094 Gene3D Ribonuclease Inhibitor 172 240 IPR032675 -
Aed6g1603 1094 Gene3D Phosphorylase Kinase; domain 1 768 884 - -
Aed6g1603 1094 Gene3D Ribonuclease Inhibitor 556 702 IPR032675 -
Aed6g1603 1094 Gene3D Ribonuclease Inhibitor 31 171 IPR032675 -
Aed6g1603 1094 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1083 - -
Aed6g1603 1094 SMART LRR_typ_2 315 338 IPR003591 -
Aed6g1603 1094 SMART LRR_typ_2 148 175 IPR003591 -
Aed6g1603 1094 SMART LRR_typ_2 436 460 IPR003591 -
Aed6g1603 1094 SMART LRR_typ_2 388 411 IPR003591 -
Aed6g1603 1094 SMART LRR_typ_2 102 126 IPR003591 -
Aed6g1603 1094 SMART LRR_typ_2 412 435 IPR003591 -
Aed6g1603 1094 PRINTS Leucine-rich repeat signature 105 118 - -
Aed6g1603 1094 PRINTS Leucine-rich repeat signature 148 161 - -
Aed6g1603 1094 SUPERFAMILY L domain-like 185 478 - -
Aed6g1603 1094 Gene3D Ribonuclease Inhibitor 241 357 IPR032675 -
Aed6g1603 1094 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Aed6g1603 1094 Gene3D Transferase(Phosphotransferase) domain 1 885 1089 - -
Aed6g1603 1094 SUPERFAMILY L domain-like 62 237 - -
Aed6g1603 1094 SUPERFAMILY Protein kinase-like (PK-like) 782 1076 IPR011009 -
Aed6g1603 1094 Gene3D Ribonuclease Inhibitor 358 505 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1603 Aed-Chr6 20010006 20014278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1603 11 1092 Receptor kinase-like Gene Family AT1G55610 32.161 4.60e-159 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Aed6g1603 Pkinase 9.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1603 - - gmx:100816573 1917.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1603 6 20010006 20014278 Aed6g1603 6 20010006 20014278 ECH