Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1597 ATGTGGAATGTAGATTCAGCAAAAAAAAAATTATTCAAAAAAAAAAAAAAAGATGTGGAATGTATGTGCCACGTAGACAAGGGTGCCATCAACCCCAGCTTGCCCAAAAATATGTTGTCTGTATGCAGTTGCAGAGAAACACACACAACAACACAGCACTGCACAGAAACAGAGAGAGAGAGAGAGAGAGAGAGAGTTAAGAGAGACGGGTCTAACTTCCTTCTTCCAACGACTTTCCATTGGATCACGTCTCCCACTCTCGCTTCTGCATTCTTCTGCCTCAGAATTGAGCATTTCCGGGTTCCATTGGTCTCTGATCGAATTGGGTATTTGCAAGATCTGCGGCTTCGTTTGTTTGAGGCAAAAAGTTTTGATCTTTGTGGTGGACCAACCCAATTACCGAAACAGCGCCATCAGATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGCTGCTTCTCAACGGATGTCTTGGAAGAAGATGAATACAGGGAGTATATGGGGGGGATTGTGGCTCAGCTACAGGATTATTTTCCAGATGCTTCTTTCATGGTATTCAACTTCCGAGAAGGGGAGAGACGCAGCCAAATCTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCATTATGAGGGTTGTCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGAGGTTGGCCAGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACCATTTATCTCCTTTGAATCCACAGCCTTCTCATTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCAGCGGAAACACCCTTATTTTTGAATTGTCTGATTCTTAGAGTCCTTCCATTATTTGAAGATGAAAAAGGTTGCAGGCCTGTTTTACATGTTTATGGCCAGGACCCTTCAATTCCTGCCAATAGAAGTTCAAAGCTACTTTTTTCAACTTCAATATCCATAAAGCATGCTCGCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACATCCATTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTTAATACATGTAAATAAAGATTTTGTTCAGGAGGAGATGATATTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACATATTTCCCAAGGACTTCAAAGCAGAGGTGCGTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGGGAAGATGCAAATGAGACTGAGAGTGCCGAGACAGAAAGTGCTTCACCTGATGAATTCTATGAAGTAGAAGAGATTTTCAGCAGTGTAATTGATGCACAGGAAGGTAGGACAGAGTCTGATTCTCAAGCTTTTCATGAAAATACAGTGGATGTTGAAACTCATAATGAGGACTGGAGGCAAGAGTCGGATCCTCATACTTTTGAGGATTGTACACCCGATGACAGGATTCACAAGCAGGTTGACAAGATGGATTCTGGTATTAATGCAGTGAAAGACATCTCTATTGATGATGTGCACTATAAATTTGATGGGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCAACTTCCACTGCAGTTATTTCTGATATGATGAAACCACCTCTGGAAACAAAGGAAGTCACCATGGATGAGCACCAAGAATTAACAGTTATGCAAAATGAATATGATGAAGATAAGGAGGCAACAGAAAAGGAATTAGATTCCAAGGCAGAGCACCAGATGCCTGATTTGTCTGAACAAAAATCTGGTAAATTACTTCCATCTACTGCCAAGAAACAACCTCCATCTAACTCAAAGCCAGTTGGAGATACATTTGCAGCAAAGCCAAAGATTAAACAGCAAGATACCCATAGTTTTCAGGCAAAACAAGCTAAGCCGAGTGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTCTCCTCCTCAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCTGTCGTTTCTATGGACAAGACAAATGACCTAAAAAGCCGGAAGATGGCCACTTCAAAATCTTCTGGCCTAGGGGAAGAAGTAGATGAAAAATGTCCACCATCACCATTGCCAGCAATTAATGAGACATCTTTTCAGTCAGATACTCAAGCACAACAGAGCTCAGAGCAAGTGCTACAGCCTCCCCCATCACCTCCCCTTCCATCCCAAAGTAGAATCTCTTCACATGTTTTTGAATCCTTATCATTAAAGGATGATGTATCAGCTTCAGACTCTCCATCTCCACTGGTATCACCATCTTTGGGTGGAAAGAGGTCCATCATGGCGGCGGCGGCGGCGCCGCCACCACCACCACCACCTCCTTCAACTTTAACATCATTTATGAGACAACCTGAAACTTCTCTTCCTTCCCATTCACCCCCACCCCCACCTCCACCTCCACCTCCACCTCCACCCCCATTTTTTGGGCAAAATAAAGGGAGCTTAGTACCTTCCGCATCCCATCCAGATCATAGTCTTTCTGAAGTGGGTACTGCAGTGGCACCTTCACAGTCTCCTCCTCCACCACCTCCAATGCCTCCTCCAAGGTACGAAGTTTCATCCATTCCTCCTCTAACACCATTAACATCAGCTCTTCCAAAGCATGGAATTCCATCAATTCCTCCTCCTACCATGTTTCCTACAACTTCAACACATAGAGGTCTGCCTCCTCCTCCCCCCCCACCACCATCATTTGCATCACATAAAGCTTCACCTCCACAAGCACCCCCACCTCCATCTCCACCTCCAACTGCATCTCTGGCTCCGCCTCCCCCTCTACCACCCTTAGCTAATTCACATATATATTCAGCTACACCACCTGTACCTCCACCGCCACCTCCCCCTCCTTTCGGTAAAGCTTCACTACCTCCATTTCCACCTTCTTTTAATAGAGCTCCACCACCTCCACCTCCACCTCCTTTTAGTCAAGCTCCACCACCACCACCGCCACCTCCTCCTCTATTGCATAGAACTCCACCTATGCCTCCCCCCCCACCACCTCTTCCTTTGTCAACTAGAGCCCCACCTCCCACACCACCACCTCTTCCTCTGTCAAGTGGAGCCTCCCCACCTCCACCTCCACCTCCACCACCTCTTCCTCGTGGAGCCCCATCTCCACCTCCACCTCCTCCATTGAGCCACACCTCCCCACCTCCTCCAATTCGTGGAGCACCGCCGCCACCACCACCTCCTCCAATGCATGGAGCACCACCTCCACCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTGGTGGGCGAGGACCACCTCCTCCACCTCCTCCAATATATGGAGCACCACCTCAACCACTACCTCCTGGCGGTCGAGGACCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTGGTGGTAGAGGACCACCTCCTCCACTCCCTCCTGGTGGTCATGGTCCTCCTCCTCCCCCTGGTGTTCCTGGTGCTCCTAGACCTCCTGGAGGTCCTCCACCACCTCCTGGAGGTGGAGCATATCCAAGAGGGAGGGGGCGTGGTGGTCCACGTCCTGCAGGAGGTATGGCACCCAAAAGATCCTCCTTAAAGCCTTTGCATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTACAAATGTTGCAAAACCTGCCGATTCTGGCAAATCTGGAGGAAAAAAGTCTGTTGGAGCTAAACCTGAGATAGTCACCTTGGTTGATCTAAGGAGGGCAAATAATACTGAAATTATGCTCACCAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTTTGGATGAGTCGGTATTGGATCTTGATCAAGTGGAAAATCTCATTAAGTTTTGTCCAACCAAAGAGGAGATGGATCTTTTGAAGGTGAAGTTTAACAAATCTCATCTTGTTTTAACAATTAAGGCATACACTGGTGACACGGAGGTTTTGGGGAAGTGTGAACAGATTACAGAATTTAAGAAGAGTTTAAACATTGTGAACTCTGCCTGTGAAGAGGTCCGGTTTTCTCTTAAACTGAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACTGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTCAAAGCTCGCCGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGATAAGTCTCCTGGGCTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAATTTCCACTAAGATACAATTGAAGTCATTAGCAGAGGAGATGCAGGCAATCATTAAGGGATTAGAAAAGGTTCAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGCCTTCGAAGTTTTCCATCAGAGATTGAAAGAATTTATAGCTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTATAGTGGGTAGAAGTGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTAAATGCCCATTTGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATATAAAAAATGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGGAGAAGGCCAAGGGCGTTAACTTGACAAAGAAGGGTGGAAAAGATAGTTGA 5118 0.4562 MWNVDSAKKKLFKKKKKDVECMCHVDKGAINPSLPKNMLSVCSCRETHTTTQHCTETERERERERVKRDGSNFLLPTTFHWITSPTLASAFFCLRIEHFRVPLVSDRIGYLQDLRLRLFEAKSFDLCGGPTQLPKQRHQMALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYREYMGGIVAQLQDYFPDASFMVFNFREGERRSQISDIFSQYDMTVMEYPRHYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHHLSPLNPQPSHLRYLQYISRRHLGSEWPPAETPLFLNCLILRVLPLFEDEKGCRPVLHVYGQDPSIPANRSSKLLFSTSISIKHARHYLQAECMLVKIDIHCRVQGDVVLELIHVNKDFVQEEMIFRVMFHTAFVRSNILMLSRDEIDILWEAKDIFPKDFKAEVRFLDADAVIPDLTTVTVREDANETESAETESASPDEFYEVEEIFSSVIDAQEGRTESDSQAFHENTVDVETHNEDWRQESDPHTFEDCTPDDRIHKQVDKMDSGINAVKDISIDDVHYKFDGSMDSDPHAVKDIAVDDGEIKSTSTAVISDMMKPPLETKEVTMDEHQELTVMQNEYDEDKEATEKELDSKAEHQMPDLSEQKSGKLLPSTAKKQPPSNSKPVGDTFAAKPKIKQQDTHSFQAKQAKPSAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNFSSSKEKMEDAKTRSLSAPVVSAVVSMDKTNDLKSRKMATSKSSGLGEEVDEKCPPSPLPAINETSFQSDTQAQQSSEQVLQPPPSPPLPSQSRISSHVFESLSLKDDVSASDSPSPLVSPSLGGKRSIMAAAAAPPPPPPPPSTLTSFMRQPETSLPSHSPPPPPPPPPPPPPPFFGQNKGSLVPSASHPDHSLSEVGTAVAPSQSPPPPPPMPPPRYEVSSIPPLTPLTSALPKHGIPSIPPPTMFPTTSTHRGLPPPPPPPPSFASHKASPPQAPPPPSPPPTASLAPPPPLPPLANSHIYSATPPVPPPPPPPPFGKASLPPFPPSFNRAPPPPPPPPFSQAPPPPPPPPPLLHRTPPMPPPPPPLPLSTRAPPPTPPPLPLSSGASPPPPPPPPPLPRGAPSPPPPPPLSHTSPPPPIRGAPPPPPPPPMHGAPPPPPMYGAPPPPPPPGGRGPPPPPPPIYGAPPQPLPPGGRGPPPPMYGAPPPPPPPGGRGPPPPLPPGGHGPPPPPGVPGAPRPPGGPPPPPGGGAYPRGRGRGGPRPAGGMAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSTNVAKPADSGKSGGKKSVGAKPEIVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDLDQVENLIKFCPTKEEMDLLKVKFNKSHLVLTIKAYTGDTEVLGKCEQITEFKKSLNIVNSACEEVRFSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLSKLADTRASNSKMTLMHYLCKVLADKSPGLLDFHLDLVSLEISTKIQLKSLAEEMQAIIKGLEKVQQEFAASANDGPAFEVFHQRLKEFIAVSESEVASLTNLYSIVGRSADALALYFGEDPAKCPFEQVTTTLLNFIRLFRKAHEENIKNAELEKKKAEKEAEMEEKAKGVNLTKKGGKDS 1705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1597 1705 MobiDBLite consensus disorder prediction 914 936 - -
Aed6g1597 1705 Pfam C2 domain of PTEN tumour-suppressor protein 339 475 IPR014020 -
Aed6g1597 1705 ProSiteProfiles C2 tensin-type domain profile. 339 478 IPR014020 -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 1063 1292 - -
Aed6g1597 1705 Gene3D Protein tyrosine phosphatase superfamily 148 345 IPR029021 -
Aed6g1597 1705 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 340 475 IPR035892 -
Aed6g1597 1705 Pfam Formin Homology 2 Domain 1467 1664 IPR015425 -
Aed6g1597 1705 Pfam Formin Homology 2 Domain 1310 1468 IPR015425 -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 1679 1705 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 785 1320 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 939 960 - -
Aed6g1597 1705 SMART PTEN_C2_2 337 477 IPR014020 -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 1011 1056 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 961 980 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 706 731 - -
Aed6g1597 1705 Gene3D Formin, FH2 domain 1469 1704 IPR042201 -
Aed6g1597 1705 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1305 1690 IPR015425 -
Aed6g1597 1705 Gene3D Formin, FH2 domain 1324 1468 IPR042201 -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 646 673 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 864 878 - -
Aed6g1597 1705 Gene3D - 346 476 - -
Aed6g1597 1705 PRINTS Proline rich extensin signature 961 977 - -
Aed6g1597 1705 PRINTS Proline rich extensin signature 997 1022 - -
Aed6g1597 1705 PRINTS Proline rich extensin signature 927 948 - -
Aed6g1597 1705 PRINTS Proline rich extensin signature 893 909 - -
Aed6g1597 1705 PRINTS Proline rich extensin signature 913 925 - -
Aed6g1597 1705 Coils Coil 1665 1694 - -
Aed6g1597 1705 Coils Coil 1571 1591 - -
Aed6g1597 1705 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 327 IPR029021 -
Aed6g1597 1705 PANTHER FORMIN-J 140 1136 - -
Aed6g1597 1705 PANTHER FORMIN-J 1217 1694 - -
Aed6g1597 1705 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1379 1693 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 890 904 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 677 695 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 646 731 - -
Aed6g1597 1705 MobiDBLite consensus disorder prediction 818 837 - -
Aed6g1597 1705 SMART it6_source 806 1705 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1597 Aed-Chr6 19946195 19966177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1597 140 779 FH2 protein (formin) Gene Family AT5G07740 60.185 0.0 768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1597 6 19946195 19966177 Aed6g1597 6 19946195 19966177 ECH