Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1592 ATGGGTCTGGTTGAAGAGCGATCTGAAATAGTGTTCTTCGATGTGGAGACGAGCGTTCCGACCCGAACGGGTCAGGGTTTTGCGCTTCTGGAATTCGGAGCCATACTGGTTTGCCCCAGGACGCTCACGGAGCTCCACAGTTACTCCACTCTCGTCTGTCCCGCCGACCTCTCCGTCATCTCCCCCTTGTCCGAGCGCTGCAATGGCATCACCTCCGCCGCCGTCTCCGCCGCCCCTTCTTTCGCCGACATTGCTCACCTCGTCTACGACCTCCTCCACGGGAGGATTTGGGCGGGGCATAATATTATAAGATTCGACTGTGTTCGGATTAGAGATGCGTTTTCTGCGATTAATCAGCCGCCACCTGAACCTAAGGGCACCATTGACTCTCTGGTCTTGTTGACTCAAAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGGCTTGGACGCCAGACACATAGGAGCTTGGATGATGTTCGGATGAATCTTGAAGTCCTCAAATACTGTGCAACTGTTCTATTCTTGGTAATTTCTAATTCTAAGTCTTGGTTATGTGGTTCTTCAGCAACAACAACTTTTGTTCTGGTTAAGGAATCAAGTCTCCCAGATATATTAACTGCAAATAGTTGGGTTTCACCAAATGCTGTTACAAGAAGCCGCAGTAATGCGAAATCTCCATCACAGGGGGGCTTATTAAATATTAATAAAGATTCTGTATTATCATCTCCTGCACCTGAATCCAAAGACAAAATTCATCCAATAATTTCTTTTGCAATGAGCAGCCCAACAGGGAATGTCCCAGATATTGCAGATCCTAATATAGTTCAATCGGATCCTTTTAATTTGAGCGCTCTTGAGGCTGAAATAAAAGGAGAATCCATTAAGTCCGATGTTGCCATTTCCTCATCTTCTGTATCTCAGCCTTGCAGCAGCTCTATTGCTGTATTAGAACCTGATGGAATATGTATTCCTTCTATTGATGCATCTCTTGTTCCATCTTTTCGTGGCAGTCACAGGATAGAATTACTGCATGAAGGTTTCCCATTTCAGCTTCATTGTACTGATTTGAAAGTGCGGTTTGGAATAAACACAAAGTTTTTTGATAGTGCTGGCCGGCCACGATTGAGTTTTGTGGTTGATCCATCACCAAGTCTATGTAATGTTCTTGATGCATGTGACCACGTAGTACAGAAGTTAACCGTGGATTCTGGTAGCAGCTCTGATTGGAGGCCTGTTGTTATTAGGAAAGAAGGCTTCTTCAACTATCCTACTATCAGATTGCACATACCTACAGCAGTAGTGGCAGACGTTGCTATTTATGCCACGGAAATATATCAAAGAGAATCATCTGGAACAGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACATTTGTTGATGCCTTCTTCTCCTTAGATCCTCTGGCTACGATGGATGCTGAAACTGAGACTGAGGAACTTATTAATTTGAACAATAAATCAAGTAACTGTGGTGGAAATAATAGTAAGAGTGGCGATGGCTTTATTGACAGAAGCAAAGTAAGGATTTTGTTGTGTGATAATGATTCCAAGAGTTCTGAAGAGGTTTTTACTCTTCTTTTGGGATGCTCTTATCAGGTTACTTCGGTAAAGTCAGCTAGGCAAGTAATTGATGCACTGAATGCGGAGGGGCAACATATAGACATCATACTAGCTGAAGTTGACCTTCCAATAAAGAAAGGCATGAAGCTGTTAAAGTACTTAGCAAGGGATAACGAATTGCGTCGAATCCCTGTTATAATGATGTCTGCACAAGATGAGGTGTCCATTGTTGTAAAGTGCTTGAGGCTTGGAGCCGCAGATTATCTAGTAAAGCCTTTACGCACCAATGAACTGTTAAATTTGTGGACACACATGTGGAGAAAGAGGCGCATGCTTGGACTTGTAGAGAACAACATCTTGAGTTATGACTTTGATCTGGTAGCATCAGATCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCACTAATCCAGAGACAGTAGTATCAATCCAACAAGAACAAGAGGCTAGTATTGCTGCCACTTCTGCTGTTGTGGTGGAGCTTCCTGATGCTTTTGTAGTTGTATCAGAATATCAGCCTGATGTGCCTGGAATAAGTGATCGTCGTCGAACAGGTAATCCAAGGCAGCATCCATTATGCAGCAGAACTACTGATGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTGAAGATTGGAGAGTCATCAGCCTTTTTCACCTATGTCAAAGCAACAACACTGAAGAGCAATGTTGAAGAGAGTGCTCATGTTGACAATATTGCTGCTTCAGAAGTTATGGTAGAAGATGTGAATCAAGCATGTGCTGAAAATGGGGGTAATGACCTTAAAACATACAAAAATGGAGAAATGTTTGAAAACCATTCACAAGATGACTTACCCAGCAGCAATAGTATCCCTGATTCTTTCTCTATTGAGAGATCTTGTACTCCATCTGCATCAATGGAAGTTTTGCAGCAAAAGCATTACAAGGAAGAACATTCTCAGGGAGTGGTGCATCCAAGAAATGGAAGTCATGGTTCTGAGCCTGCTCAACATGCTTATCCATATTATATTTCAGGATTTGTTAATCACGGTATGATGCCATCATCGGCACAACTATATCAAAAGAATTTCCAGGACTTGCAGAGTCATGCTTGTTCTTCTATAATTGCACAGTACAATCATCATCTTCCCCAATGTCCTCCTCATGCAAGTGGGATGTCATCCTTCCCATATTATCCAATGAACTTTTGTTTAACACCTGGTCAGGTTTCTACTAATTCTTGGCCATCATTAGGAAGTTCAAGTTCATGTGAAGTAAAATTAAGTAAAGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAAAAGAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAACAGAAAACGGCTTGCTGAAAGGCGGCCTCGCGTGAGGGGACAGTTTGTCAGAAAGTTGAATGGTGTTAATGTGGATCTTAATGGACAACCTGCTTCCACTGATTATGATGAAGATGATGAAGAAGAAGAAGACACTCATGGAGCAAGAGATTCCTCTCCTGAGGATGCTTGA 3219 0.4253 MGLVEERSEIVFFDVETSVPTRTGQGFALLEFGAILVCPRTLTELHSYSTLVCPADLSVISPLSERCNGITSAAVSAAPSFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFSAINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLVISNSKSWLCGSSATTTFVLVKESSLPDILTANSWVSPNAVTRSRSNAKSPSQGGLLNINKDSVLSSPAPESKDKIHPIISFAMSSPTGNVPDIADPNIVQSDPFNLSALEAEIKGESIKSDVAISSSSVSQPCSSSIAVLEPDGICIPSIDASLVPSFRGSHRIELLHEGFPFQLHCTDLKVRFGINTKFFDSAGRPRLSFVVDPSPSLCNVLDACDHVVQKLTVDSGSSSDWRPVVIRKEGFFNYPTIRLHIPTAVVADVAIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPLATMDAETETEELINLNNKSSNCGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVTSVKSARQVIDALNAEGQHIDIILAEVDLPIKKGMKLLKYLARDNELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRKRRMLGLVENNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSTNPETVVSIQQEQEASIAATSAVVVELPDAFVVVSEYQPDVPGISDRRRTGNPRQHPLCSRTTDGHFSSGPKKSELKIGESSAFFTYVKATTLKSNVEESAHVDNIAASEVMVEDVNQACAENGGNDLKTYKNGEMFENHSQDDLPSSNSIPDSFSIERSCTPSASMEVLQQKHYKEEHSQGVVHPRNGSHGSEPAQHAYPYYISGFVNHGMMPSSAQLYQKNFQDLQSHACSSIIAQYNHHLPQCPPHASGMSSFPYYPMNFCLTPGQVSTNSWPSLGSSSSCEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEEEDTHGARDSSPEDA 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1592 1072 CDD DEDDh 11 175 - -
Aed6g1592 1072 ProSiteProfiles CCT domain profile. 992 1034 IPR010402 GO:0005515
Aed6g1592 1072 Gene3D - 3 180 IPR036397 GO:0003676
Aed6g1592 1072 ProSiteProfiles Response regulatory domain profile. 533 651 IPR001789 GO:0000160
Aed6g1592 1072 MobiDBLite consensus disorder prediction 1037 1072 - -
Aed6g1592 1072 Pfam Response regulator receiver domain 534 645 IPR001789 GO:0000160
Aed6g1592 1072 Gene3D - 532 730 - -
Aed6g1592 1072 PANTHER TWO-COMPONENT RESPONSE REGULATOR 497 1057 IPR045279 GO:0009736
Aed6g1592 1072 SUPERFAMILY Ribonuclease H-like 9 179 IPR012337 -
Aed6g1592 1072 Pfam Exonuclease 11 174 IPR013520 -
Aed6g1592 1072 SUPERFAMILY CheY-like 528 657 IPR011006 -
Aed6g1592 1072 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 497 1057 - -
Aed6g1592 1072 SMART exoiiiendus 9 183 IPR013520 -
Aed6g1592 1072 SMART REC_2 532 647 IPR001789 GO:0000160
Aed6g1592 1072 MobiDBLite consensus disorder prediction 741 771 - -
Aed6g1592 1072 MobiDBLite consensus disorder prediction 224 243 - -
Aed6g1592 1072 MobiDBLite consensus disorder prediction 680 702 - -
Aed6g1592 1072 Pfam CCT motif 992 1034 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1592 Aed-Chr6 19901591 19909850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1592 521 1071 Response Regulator Gene Family AT5G61380 50.000 4.25e-173 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Aed6g1592 RNase_T 3.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1592 K12127 - gmx:100786522 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1592 6 19901591 19909850 Aed6g1592 6 19901591 19909850 ECH