Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1586 ATGGTTTCACTAGTGGAGCCCATGGAAGTGAAGATTAACTATTTGAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGACTTCGGCAGGAAAAAAAACTCATATTTCGGGGATAATGAGGTTGGACTCTTTTGCTAATGAATTGGGTTCTTCTGCTCTGCCACCACTCTCGGATTCTTCGCCTTCTATTGATAACAACACCAAACCTCTGAATGGTTCGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATTCCTTCACCAACTCCATTTATGGGGTTTCTTCAAACCCTTTGGACATTCTTCCCAGAATGCCACCTTCTTCTTCTGGATCCTTCTACTCCACTCATGGTGTTGTTCAAGCTTCTGCGCCTAATTTGGCATTTTCTGGCTCTGTCTACACTCTGCAGGATCACACCATCCTCAGAGCTTTGTGTGAAAACAATGGTTACAAGTCAGAGAGGGACATGATCAGTGTCTCGCAGGAAACGGGTCTTACTACTGACATCAACGCTGAAACATCCTCAAACTTTGATATGGCTAGGAGGCCCTTTGACAATCACAATCACAATCATCCATCTGTTTCTGTCGCCCCATTGGATTTTGAGGGTTTGTGGAATTACTAA 624 0.4455 MVSLVEPMEVKINYLNEWVICRVFQKTSAGKKTHISGIMRLDSFANELGSSALPPLSDSSPSIDNNTKPLNGSAYVPCFSNPIDSFTNSIYGVSSNPLDILPRMPPSSSGSFYSTHGVVQASAPNLAFSGSVYTLQDHTILRALCENNGYKSERDMISVSQETGLTTDINAETSSNFDMARRPFDNHNHNHPSVSVAPLDFEGLWNY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1586 207 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 202 - -
Aed6g1586 207 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1586 Aed-Chr6 19874034 19876070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1586 16 207 NAC Transcription Factor Family AT5G61430 41.206 2.39e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1586 - - gmx:100798002 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1061 10 9434519 9436454 Aed6g1586 6 19874034 19876070 ECH
Aed6g1586 6 19874034 19876070 Aed6g1586 6 19874034 19876070 ECH