Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1557 ATGGTGCGTTTATTTCGGGGAGTAATAAGTCGCCTCCATCTCCATGTTTCTCTTTGTCGCACCCTCGACGCAATCTCCCACACTATTCCTGCCAGCGTGGCTCCCATTCTCGCACCACGCAACCCACCTTCACCACGCACTCTCATCTCCGCCATCCAACGGCTAAAATCTCCCAAACGCTATTCCCGCGCGAATGGTAGATTTGAGATAAAGAGGTTCCACATTGGTCTGAAACTTGTTAATCAAAAAGAAGGAGTAGTAGTTACCTCCAAGGTGCCAGAAACTGGTTTGGCTTTCGAACCAACCTCCGCTGCTATTGCCAGACATGAGGAAGACCTAGAGCTGGAAAGTAAAGAAGCAGAAAATGTTTTACCTGGCAATCAAGAAATAGACATAGTGGAATCTATTATTGAAGATGCTGCACTAGATCCAGAGAAAACGAGGCAGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTCATCCGTGGGCACTTGGTTAGGAGACAAGCTGTTGCTACATTATGCTCTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGACAGTCTAATGTTGGATCTGAAATCCATGAGAAGTGCAATATATTGAACCCTCTGGATGGCAAACTTGTCAAGCCAATTGCTACATCCATGAAAATTACAAAGCTGTCTGCAAATGCTTTCATTCGCAAGCTTATTACTTCGTCAACTACAATAATGGCGCTGCGGTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAACGCTGGTCAGCATATTGCTTCTGGAAACCAGTTCCCCAACCCAAGAAAATTCGGGATACTAAGTCTCAGAGAAAGCATGGCAATATTTCAGTTGGAGATACTCATACGAGCAAGTCAAAACGAACCAACAGGAAGCTTCCTACTGCAAGTTCTGACTCAGTCCCAATGCAAACAAATCCTGAATTTGAAAAACCAAAACGAAACATGAGGAAAATTCCAAGCCAACCCTCAGATCCTCCTGTGCAGGAAAATCCACAAAGTGAACTTGAAAAGATTAAACGTAACTTGAGAAAGGTTCCCAACCCAGTTGTTGAGAATGCTGTTCCTTCAGAAGTTGAATCTGAGACCCCAAAAGAGCATTTGGAAAAGGCAACAGTTACCTCATGCCATGCTGTTTCAGAACAAGATGTCATTAGTTCTAATGAGAAGATCAAGAAGGAAGCAACATTAACTGTTTCCAGTGTGCCAGATATAGAAACTACTCCAAGACTTTCAGTTAGTAAGGAGGTGTCTGACACACCAAGCAGTTACCAAGTAACTGTGGAGTCAAAGCCCTTGACTGAGATTACAACTAAAGATAAAAACATTTCTGATGAAGTAAAATATGAGCCCATAGATTTACCAGAACCTATTTGTAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATTCTATAGGCAGTGAAAACCAGAAACCAAACCGAAAATCCTCAATTCTAGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTACCGAGTTACATGGCAGCAACTGAATCTGCAAGAGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAAAAACAACCAAACCCGGCGACATTCTCTGCCATCCTCAACTAACAGCAAAATTACTTCGCAATCACCTAGGACGCAGAGACCAGTTCAATCAGGTGGCAAAGGTGGCCACAAAAGTGACAGAACTGTATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAAGAGGTAA 1905 0.4315 MVRLFRGVISRLHLHVSLCRTLDAISHTIPASVAPILAPRNPPSPRTLISAIQRLKSPKRYSRANGRFEIKRFHIGLKLVNQKEGVVVTSKVPETGLAFEPTSAAIARHEEDLELESKEAENVLPGNQEIDIVESIIEDAALDPEKTRQEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQALVRGGRVRQSNVGSEIHEKCNILNPLDGKLVKPIATSMKITKLSANAFIRKLITSSTTIMALRLQYVPGDPNSVLSWLERWSAYCFWKPVPQPKKIRDTKSQRKHGNISVGDTHTSKSKRTNRKLPTASSDSVPMQTNPEFEKPKRNMRKIPSQPSDPPVQENPQSELEKIKRNLRKVPNPVVENAVPSEVESETPKEHLEKATVTSCHAVSEQDVISSNEKIKKEATLTVSSVPDIETTPRLSVSKEVSDTPSSYQVTVESKPLTEITTKDKNISDEVKYEPIDLPEPICKDENSHLTNGDLSHKEDSIGSENQKPNRKSSILAKQERAENGIQNSPTLPSYMAATESARAKLRAQGSPRFGQDGSEKNNQTRRHSLPSSTNSKITSQSPRTQRPVQSGGKGGHKSDRTVSSSRDGNGKVIQAEWKR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1557 634 MobiDBLite consensus disorder prediction 301 371 - -
Aed6g1557 634 PANTHER IQ-DOMAIN 5-RELATED 78 621 - -
Aed6g1557 634 MobiDBLite consensus disorder prediction 534 550 - -
Aed6g1557 634 MobiDBLite consensus disorder prediction 447 466 - -
Aed6g1557 634 ProSiteProfiles IQ motif profile. 173 200 IPR000048 GO:0005515
Aed6g1557 634 MobiDBLite consensus disorder prediction 569 603 - -
Aed6g1557 634 SMART iq_5 171 192 IPR000048 GO:0005515
Aed6g1557 634 SMART iq_5 148 170 IPR000048 GO:0005515
Aed6g1557 634 PANTHER PROTEIN IQ-DOMAIN 31 78 621 - -
Aed6g1557 634 MobiDBLite consensus disorder prediction 328 343 - -
Aed6g1557 634 Pfam Protein of unknown function (DUF4005) 533 613 IPR025064 -
Aed6g1557 634 ProSiteProfiles IQ motif profile. 149 177 IPR000048 GO:0005515
Aed6g1557 634 MobiDBLite consensus disorder prediction 475 498 - -
Aed6g1557 634 MobiDBLite consensus disorder prediction 504 520 - -
Aed6g1557 634 Pfam IQ calmodulin-binding motif 151 170 IPR000048 GO:0005515
Aed6g1557 634 Pfam IQ calmodulin-binding motif 173 190 IPR000048 GO:0005515
Aed6g1557 634 MobiDBLite consensus disorder prediction 475 634 - -
Aed6g1557 634 Gene3D - 146 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1557 Aed-Chr6 19674610 19681490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1557 78 634 IQD Protein Family AT1G74690 43.412 1.19e-123 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1557 - - gmx:100807118 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1023 10 8983819 8997740 Aed6g1557 6 19674610 19681490 ECH
Aed11g0324 11 2610643 2616037 Aed6g1557 6 19674610 19681490 ECH
Aed6g1557 6 19674610 19681490 Aed6g1557 6 19674610 19681490 ECH
Aed11g0324 11 2610643 2616037 Aed6g1557 6 19674610 19681490 PCT