Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1552 ATGGAGCTTGCTGCATCGGAGAGATCTTCAGGTGATGGAGGTAGTGGACTCAACGAAGAAAAGACTAACGATGATGCTCGTCAACATAAACAAGAGATTATTATCGAGGTTGATGATGAGCTTGAGACTGCTAAAGCTGAAATGGGTGTGGTGAGGGAAGAAAATCAACGGTTAAAGATGTGTTTGAGCAAAGTAATGAATGAATATCGGACACTAGAAATGCAATTTCAAGATATACTCAAGCAAGGGACAAAAAAGAGTAACGCTGATGAGGAAATATTAGAGGAATCGGATCTTGTTTCCCTGAGCCTTGGAAGAGTTCCGAGAAATGAGGAGAAAATAAAAGTTTCTAATAAAGCATTAATGAAGGATGATGATGAAGAAGGGTTTAACGAAGAGTTGAGTCTTGGACTAGAGTGCAAATTTGAAACATCAAAGTCAGGAAGCACAACTGAAGCTTTAGCAGAAAATAGTTGTGATCATCAACAAGTGGCAAAGGAAGAAGGTGGGGAGAGTAATAATAAGGAGGCAGTAGTGAAGACAATGAGATCAGACACAGAGGATGAAGTTGCTCAGCAAAATCCTGCAAAGAAACCACGAGTTTGCGTTAGAGCAAGATGTGACACTCCAACAATGAATGACGGATGCCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACAATTGCACCATCATGCCCAGTTAGAAAACAGGTGCAAAGATGTGTGGATGACATGTCGATATTAATCAGCACCTATGAAGGGACCCACAACCACACTCTTCCACCTGCAGCTACAGTCATGGCATCCACAACTTCCGCAGCTGCTTCCATGCTATTGTCCGGTTCATCAACCACCAATACTCTCCACGGCCTCAACTTCTATCTCTCAGATGGTTCAAAACCAAGGCAATTATACCTCTCCAACCCTGCACTATCATCTTCACCTTCACATCCAACCATCACTCTCGATCTCACTTCACACTCAGCAGCCTCTTCCTCTTCCTCTTCCTCACCCTTTGTCAGATTCTCTAATTCAAACTACAACAATCTTAGCAACCAACCCAGATTCCCCACTTCTTCAAGCCTAAGCTTCAGTAGCAATAATAATTCATCCGAAATTAGCAATGCTCTATCTTGGAACAACGGCTTCCTCAACATTAATAATAATAATACTACTGCTCAGCCATATAGTAACAACAGGAACATCCTTAGCAGTGTAAACATGTACCAATCCTACATGCAAAACAACAACCAAGGTGATACTATATCTGCAGCAACGAAAGTGATAACAGCGGACCCCACTTTTCAGTCAGCTTTGGCAGCAGCGCTTACTTCGTTTATTGGCGGTGGAAATCAAGGTGGTAATGTTGGAGAAAGTTGTTTGAGTTTGGGTCAGAAAATGATGAAGTGGGGTGGTGATCAGGTTAATTCTTCGAATAAAGTCAACGGTTGTGCATCGAGCTTGATCTTGAACAAAACGTCATCACCACCACCAAATACACAGACGAAAAGTTTGATGTTTCTGCCACCACCGTCGTCGTCTCAATTGCCGTTTACTAATTCTTCTACCCCAAATAGTGCATCTGCATCTCCTGCTCATAATAGCGACGCCACCGATTAA 1656 0.4245 MELAASERSSGDGGSGLNEEKTNDDARQHKQEIIIEVDDELETAKAEMGVVREENQRLKMCLSKVMNEYRTLEMQFQDILKQGTKKSNADEEILEESDLVSLSLGRVPRNEEKIKVSNKALMKDDDEEGFNEELSLGLECKFETSKSGSTTEALAENSCDHQQVAKEEGGESNNKEAVVKTMRSDTEDEVAQQNPAKKPRVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTIAPSCPVRKQVQRCVDDMSILISTYEGTHNHTLPPAATVMASTTSAAASMLLSGSSTTNTLHGLNFYLSDGSKPRQLYLSNPALSSSPSHPTITLDLTSHSAASSSSSSSPFVRFSNSNYNNLSNQPRFPTSSSLSFSSNNNSSEISNALSWNNGFLNINNNNTTAQPYSNNRNILSSVNMYQSYMQNNNQGDTISAATKVITADPTFQSALAAALTSFIGGGNQGGNVGESCLSLGQKMMKWGGDQVNSSNKVNGCASSLILNKTSSPPPNTQTKSLMFLPPPSSSQLPFTNSSTPNSASASPAHNSDATD 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1552 551 Gene3D WRKY domain 197 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1552 551 MobiDBLite consensus disorder prediction 1 30 - -
Aed6g1552 551 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1552 551 MobiDBLite consensus disorder prediction 501 551 - -
Aed6g1552 551 Pfam WRKY DNA -binding domain 213 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1552 551 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1552 551 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 536 IPR044810 GO:0003700
Aed6g1552 551 SUPERFAMILY WRKY DNA-binding domain 205 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1552 551 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 21 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1552 Aed-Chr6 19646721 19650871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1552 22 461 WRKY Transcription Factor Family AT1G18860 42.442 1.04e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g1552 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1552 - - gmx:100805360 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1022 10 8973453 8977933 Aed6g1552 6 19646721 19650871 ECH
Aed3g0415 3 2962195 2964595 Aed6g1552 6 19646721 19650871 ECH
Aed11g0320 11 2589173 2594924 Aed6g1552 6 19646721 19650871 ECH
Aed6g1552 6 19646721 19650871 Aed6g1552 6 19646721 19650871 ECH