Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1551 ATGTTCAAGCTTTTGGCTAGTAGAGCCGCTAGGGTTCCAAATGCATGCAACAACAATGCCTTTGCTTCTTTCAGTTTTTCTAGGTATGCTCATTCAATACCATTTGCAACTGTAGAAGCAGAAGAGATATCAGGCTCTACGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAATACAGTTGTGGATCCATTAAATGGAGACTCATTTATTAAAGTTGCCGAAGTTGATGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACACGGTGTACACAACCCTTTTAAGTCGCCAGAGAGGTATCTCATGCTTGGAGAGATATCTGCTAAGGCAGCACATATGTTATCACTTCCCAAGGTTACGGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGGGAAGTCTATGTGACACAAAAATTTCTAGAAAATTTTTGTGGAGATCAGGTTCGCTTCCTGGCAAGATCTTTTGGTGTACCTGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCCGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCTCTCCTTCAATTGATGGGTGCACTTTACATGGGCAACAAGCCAGTCCTTAAAGTGAGTATTGTTATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTCTAGAAGATGTAGATTTCATAAATTCTGATGGGAAGACAATGAACAAACTGTTACTAGAGGGAAATCCACAAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTGAAGGGCCGCGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATAGCATGGGTCTGTGATCAAGATGCATACGCATGCAGTGGTCAGAAATGCTCAGCACAATCATTGTTATTTATGCATGAGAATTGGTCTAAAACTTCCCTGCTATCTAAGTTGAAAGATCTTGCTGGGAGAAGAAAGTTGGCAGACTTGACAATCGGCCCAGTTCTCACAGTTACAACTGATTCAATGCTTGAACACATCAATAAGTTGCTTGAGATACCAGGATCAAAGTTGCTATTCGGGGGTCAACCTCTAGAGGATCATTCAATTCCATCTATTTATGGTGCTATGAAACCAACAGCTGTCTATGTTCCTCTTGAGGAAATTATGAAGGATAAGAATTTTGAGCTTGTGACAAAAGAAATATTCGGACCATTTCAGGTTATTACCGATTACAAAAGCAGTCAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCGAATGATCCTTTGTTTGGACCCGCTGGTGATGCTAGAGGTGCAGGAATTGGAACACCAGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATAATCTATGATCTTGGGCCTGTGCCAAAGAATTGGGAAGTTCCTCCTTCTACTTGA 1560 0.4141 MFKLLASRAARVPNACNNNAFASFSFSRYAHSIPFATVEAEEISGSTPAEVLNLVQGKWVGSSNWNTVVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGVHNPFKSPERYLMLGEISAKAAHMLSLPKVTDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPVLKVSIVMEQMLRLLHTCGLPLEDVDFINSDGKTMNKLLLEGNPQMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAGRRKLADLTIGPVLTVTTDSMLEHINKLLEIPGSKLLFGGQPLEDHSIPSIYGAMKPTAVYVPLEEIMKDKNFELVTKEIFGPFQVITDYKSSQLSVVLDALERMHNHLTAAVVSNDPLFGPAGDARGAGIGTPEAIKLVWSCHREIIYDLGPVPKNWEVPPST 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1551 519 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 300 476 IPR016163 GO:0016620
Aed6g1551 519 Pfam Aldehyde dehydrogenase family 67 472 IPR015590 GO:0016491
Aed6g1551 519 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 475 518 - -
Aed6g1551 519 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 11 475 - -
Aed6g1551 519 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 11 475 IPR044638 GO:0004029
Aed6g1551 519 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 475 518 IPR044638 GO:0004029
Aed6g1551 519 SUPERFAMILY ALDH-like 53 473 IPR016161 GO:0016491
Aed6g1551 519 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 299 IPR016162 GO:0016491
Aed6g1551 519 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 323 334 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1551 Aed-Chr6 19633699 19640187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1551 1 519 Aldehyde Dehydrogenase Gene Family AT5G62530 73.741 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1551 K00294 - gmx:100806579 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1551 6 19633699 19640187 Aed6g1551 6 19633699 19640187 ECH