Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1550 ATGTTTACAATGTATAGCAGGTGTGCTCATTCATTATCATTTGCCACAGTAGAAGCAGACGAGATATCAGGTTCTAGGCCTGCTGAAGTTTTGAACTTGGTGCAAGGCAAATGGGTTGGATCTTCAAATTGGAATACAATTGTAGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGACACAGGCATTAAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCTAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTTTGGAGACATAACTACTAAGGCAGCTTACATGCTATCACTTCCCAAGGTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAAAGTTACCAGCAGGCTTATGGAGAAGTGTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGGTGTCCCTGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCCGTGGCAATTATCACTCCTTTTAATTTTCCCTTGGAGATTCCTGTCCTTCAATTGATGGGTGCACTTTACATGGGCAACAAGCCAGTTCTTAAAGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATGCCTGTGGCTTACCTACAGAAGATGTAGACTTTATAAATTCTGATGGGAAGATAATGAACAAGCTGTTGCTGGAGGTTGGTTGTTTGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTGAAAGGTCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCAATCAGGGTATGGAAGATTACATAGCGTGGGTCTGTGATCAGGATGCATACGCATGCAGTGGTCAGAAATGCTCAGCACAATCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTTCTGCGAGAAGAAAGCTAGAAGACTTGACAATCGGCCCAGTCCTCACATGCACGACTGATATGATGCTAGAACACACGAAAAAATTGCTTGAGATACCAGGATCAAAGCTGCTCTTTGGGGGTAGCCCTCTAGAGAATCATTCAATTCCATCTATTTATGGTGCCATTAAACCAACAGCTGTCTATGTTCCTCTGGAGGAAATTATAAAGGATAAGAATTTTGAGCTTGTAACAAAAGAAATATTTGGACCCTTCCAGGTTATCACTGACTACAAAAACAGTCAACTATCAGTTGTATTGGATGTTTTGGAAAAAATGCATAACCATTTAACAGCTGCTGTAGAAGTTGTTGGGAATTCAGTAAATGGTACTACTTATGCTGGTCTAAGAGCAAGGACAACCGGAGCTCCTCAGAATCATTGGTTTGGACCCGCAGGTGATGCTAGAGGTGCAGGAATTGGAACACCAGAGGCTATAAGACTTGTATGGTCTTGCCACAGAGAAGTTATTTATGATTTTGGGCCTGTGCCAAAGGATTGGAAAATTCCTCCAACCACTTGA 1578 0.4106 MFTMYSRCAHSLSFATVEADEISGSRPAEVLNLVQGKWVGSSNWNTIVDPLNGDSFIKVAEVDDTGIKPFVESLSSCPKHGVHNPFKAPERYLMFGDITTKAAYMLSLPKVSDFFTKLIQRVSPKSYQQAYGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVSIVMEQMLRLLHACGLPTEDVDFINSDGKIMNKLLLEVGCLANPRMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVNQGMEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLSARRKLEDLTIGPVLTCTTDMMLEHTKKLLEIPGSKLLFGGSPLENHSIPSIYGAIKPTAVYVPLEEIIKDKNFELVTKEIFGPFQVITDYKNSQLSVVLDVLEKMHNHLTAAVEVVGNSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIRLVWSCHREVIYDFGPVPKDWKIPPTT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1550 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 285 465 IPR016163 GO:0016620
Aed6g1550 525 SUPERFAMILY ALDH-like 32 453 IPR016161 GO:0016491
Aed6g1550 525 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 308 319 IPR016160 GO:0016491
Aed6g1550 525 Pfam Aldehyde dehydrogenase family 110 433 IPR015590 GO:0016491
Aed6g1550 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 281 IPR016162 GO:0016491
Aed6g1550 525 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 6 524 IPR044638 GO:0004029
Aed6g1550 525 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 6 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1550 Aed-Chr6 19626998 19632536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1550 6 525 Aldehyde Dehydrogenase Gene Family AT5G62530 77.154 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1550 K00294 - gmx:100813821 969.533