Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1533 ATGGGGGACAAGTCCCAAGTACTGGAGGCTGTGTTGAAGGAAACTGTGGATTTGGAGAGCAAAATTTTGAAGTTTTTGGGATTTATGTGGAACCCTCTGTCATGGGTTATGGAGGCTGCTGCTATAATGGCTATTGCGCTTGCAAATGGAGGGGGGAGGCCTCCTGATTGGCAAGACTTTGTGGGTATCATTACTTTGCTTGTCATCAATTCAACTATCAGTTTCATTGAGGAGAACAATGCTGGTAATGCTGCAGCAGCTCTCATGGCTCGGCTCGCTCCAAAAGCAAAGTATATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATTGCTACTGGTGTTCATACCTTCTTTGGAAAAGCTGCTCATCTTGTGGATACTACCAATCAAGTGGGACACTTTCAAAAGCTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTTATATGGTTATATAACATCATATTCTACATCCCACTCGATATCATTAAATTTTTAATTCGCTATGCTCTTAGTGGTAGGGCTTGGGACCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTTGGAAAGGAACAACGTGAACTTCAGTTGAGAGAACTTCATACACTAAAAGGTCATGTAGAATCAGTAGTGAGATTGAAGGGGCTTGACATAGACACAATTCAGCAAGCATACACAGTCTAA 714 0.4286 MGDKSQVLEAVLKETVDLESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKAKYILVLPANKERLKLWSLLLVFIPSLEKLLILWILPIKWDTFKSFAAIEGIGWGWAGVIWLYNIIFYIPLDIIKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1533 237 PANTHER PLASMA MEMBRANE ATPASE 1 137 211 - -
Aed6g1533 237 PANTHER PLASMA MEMBRANE ATPASE 1 18 98 - -
Aed6g1533 237 Gene3D - 193 237 - -
Aed6g1533 237 PANTHER CALCIUM-TRANSPORTING ATPASE 137 211 - -
Aed6g1533 237 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 104 IPR023298 -
Aed6g1533 237 Gene3D - 102 176 - -
Aed6g1533 237 Gene3D - 28 101 - -
Aed6g1533 237 PANTHER CALCIUM-TRANSPORTING ATPASE 18 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1533 Aed-Chr6 19534866 19541588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1533 1 99 Primary Pumps ATPases AT5G62670 66.906 3.41e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1533 K01535 - gmx:100802859 176.407