Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1532 ATGGGGAACTGCAACGCGTGCGTGAGAGGAGATGACGTGGAAGAGACGAACCGCGGGAAAAAGAAGAAGAACAAAACCAAACCGAACCCGTTCGCGGAGGAAGAGCTACGCTCCGGCGTCCCGATCCGCGTGCTCAAGGACGTGACGTCACGGAGCCTGATCGGCGACAAGTACGTGATAGGCCGGGAGCTAGGCCGCGGCGAGTTCGGGATAACGTACCTCTGCACCGACCGCGAGACGAAGCACGAGCTCGCGTGCAAGTCAATCTCCAAGCGGAAGCTGAAGACCGCGATCGACGTCGAGGACGTGCGCCGGGAGGTGGCAATCATGTCCACCCTGCCGGAGCACCATAACGTGGTGAGGCTCAAGGCGACTTACGAGGATCAGGAGAACGTGCATCTCGTCATGGAGCTCTGCGCCGGCGGGGAGCTCTTCGACCGGATCGTCGCCAGGGGCCATTACAGCGAGCGCGCGGCGGCGCACGTCGCTAGGACAATTGCTGAGGTTGTTAGAATGTGTCACGCTAATGGCGTCATCCATCGTGACCTCAAGCCCGAGAATTTCCTCTTCGCGAACAAGAAGGAGAATTCTGCTCTTAAGGCCATTGACTTTGGCCTCTCCGTTTTTTTCAAACCCGGGGAGAGATTTTCAGAGATTGTGGGGAGTCCTTACTATATGGCGCCGGAGGTATTGAAGAGGAACTACGGGCGGGAAGTGGATGTGTGGAGTGCTGGGGTGATTCTTTATATTTTGTTGTGTGGGGTTCCTCCTTTCTGGGCAGAGGATGAAAGAGGTGTGGCTTTGGCTATTTTGAGGGGAGTGATAGACTTCAAGAGGGAACCTTGGCCTCAGATTTCAGATAGTGCTAAGAGCCTTGTGCGGCAGATGTTGGAGCCTGATCCTAAAAAGCGCTTGACAGCTGAACAGGTGCTTGAGCATTCCTGGTTACAAAACGCAAAGAAGGCTTCAAATGTTCCATTAGGAGATATTGTGAGGACAAGGCTGAAGCAGTTCTCTGTGATGAACAGATTCAAGAAGAGAGCACTTCGGGTTATTGCAGAGCATTTATCTGTTGAAGAGGTAGAAATAATCAAAGACATGTTTACATTGATGGATACTGACAAAGATGGCAAAGTAACTTATGAGGAGCTGAAGGCTGGGTTACGGAAGGTTGGTTCACAATTGGATGAGTCAGAGATAAAGATGCTAATGGATGTGGTAGGCTTCTGTAAACTTTATAGCATTTATAATGCTGATGTTGATGGTAATGGAGTACTTGACTATGGAGAGTTTGTAGCCGTGACAATTCACTTGCAAAGAATGGAGAACGATGAGCATTTCCGCAAAGCATTCATGTATTTTGACCAAGATGGGAGTGGATATATCGAGTTAGGTGAGCTAGAGAAAGCATTAGCAGACGAGTCAGGAGAAACTGATTCTGCTGTGTTGAATGACATCATGCGCGAAGTTGACACTGACAAGGATGGTCGCATCAGTTATGAAGAGTTTGTGGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTAGACAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCATAAATTTGATGAAGGATGGCTCACTTCAGCTTCACGATGGTATTAGTGGCCAAGCTGTAGTAGTTTGA 1656 0.4964 MGNCNACVRGDDVEETNRGKKKKNKTKPNPFAEEELRSGVPIRVLKDVTSRSLIGDKYVIGRELGRGEFGITYLCTDRETKHELACKSISKRKLKTAIDVEDVRREVAIMSTLPEHHNVVRLKATYEDQENVHLVMELCAGGELFDRIVARGHYSERAAAHVARTIAEVVRMCHANGVIHRDLKPENFLFANKKENSALKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGREVDVWSAGVILYILLCGVPPFWAEDERGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLEHSWLQNAKKASNVPLGDIVRTRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGKVTYEELKAGLRKVGSQLDESEIKMLMDVVGFCKLYSIYNADVDGNGVLDYGEFVAVTIHLQRMENDEHFRKAFMYFDQDGSGYIELGELEKALADESGETDSAVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDGISGQAVVV 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1532 551 Gene3D Phosphorylase Kinase; domain 1 59 143 - -
Aed6g1532 551 Gene3D Transferase(Phosphotransferase) domain 1 144 324 - -
Aed6g1532 551 ProSiteProfiles Protein kinase domain profile. 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1532 551 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Aed6g1532 551 CDD STKc_CAMK 57 315 - -
Aed6g1532 551 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
Aed6g1532 551 CDD EFh 446 508 IPR002048 GO:0005509
Aed6g1532 551 Pfam EF-hand domain pair 445 508 IPR002048 GO:0005509
Aed6g1532 551 Pfam EF-hand domain pair 364 434 IPR002048 GO:0005509
Aed6g1532 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 10 527 - -
Aed6g1532 551 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Aed6g1532 551 SUPERFAMILY Protein kinase-like (PK-like) 54 324 IPR011009 -
Aed6g1532 551 SMART serkin_6 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1532 551 PANTHER BNAA09G44420D PROTEIN 10 527 - -
Aed6g1532 551 ProSiteProfiles EF-hand calcium-binding domain profile. 478 513 IPR002048 GO:0005509
Aed6g1532 551 SUPERFAMILY EF-hand 344 534 IPR011992 -
Aed6g1532 551 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Aed6g1532 551 SMART efh_1 446 474 IPR002048 GO:0005509
Aed6g1532 551 SMART efh_1 482 510 IPR002048 GO:0005509
Aed6g1532 551 SMART efh_1 399 438 IPR002048 GO:0005509
Aed6g1532 551 SMART efh_1 363 391 IPR002048 GO:0005509
Aed6g1532 551 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Aed6g1532 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Aed6g1532 551 Pfam Protein kinase domain 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1532 551 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Aed6g1532 551 Gene3D - 325 511 - -
Aed6g1532 551 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1532 Aed-Chr6 19522219 19527174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1532 1 551 EF-hand Containing Proteins AT1G74740 76.311 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed6g1532 Pkinase 1.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1532 K13412 - gmx:100800559 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1532 6 19522219 19527174 Aed6g1532 6 19522219 19527174 ECH