Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1530 ATGGGGCACAAAAAGCGAAACCCTGTGACGCGCTCGAAACCATCCACGGCGGCGGCTTCTCCGGCGGTGCAATCCGGCGGAGCCGCCAATGGTGGCGCCATCTCGCCGGACGCTGACAACGCCTGCAATGCTTCGGATCACAATCCGCATAACCCTAGAAAGATCGAATTTGCCCCCCCGCCCCCCCAATCTGAGGGTTCAGATTACTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTCCGCCGCGGTAACCACACCAAGGCAATGAAGCAGTTGCGGGAGATTTGCGCCCGGGAGGAGGGCTCCCCTCACTCCGCCTTCGTCCACCGAGTCCACAGCCTAATGTGCTTCAAAACCGCCACGGTCATCACCGACCCCAACTCCAAGCAGCGCCATTTGAAGAACGCGCTCGAGTCGTCGCGCCGCGCGGTGGAGCTCATGCCGCATTCCGTCGAGTACGCGCATTTCCGCGCCACGGTGTTGCTGGAGGCGGCGAGTGATGCGAAGGAATACGAGGAGGTGGTGCAGGAGTGCGAGAGGGGGCTCGCCATTGAGAACCCCAGTGATCCCGCCAAGGAGACATTGCAGGATGAGAGCGAGCAGAAAGGATTAACTCTTGGGGAGCGGATAGCGCACGTGCAGAATGAGTTGAGGCAGCTTATTCAGAAGTCGAATATAGCTTCCCTGTCCACCTGGATGAAGAGTTTGAGTAATGGTGAGGAGAGGTTTCGTTTGATTCCGATAAGGAGGACCCCGGAGGATCCCATGGAGGTGAGGTTGGTTCAAACTAGAAGGCCTAATGAGATCAAGAAGGTCACTAAGACACCTGAGGAGAGGAGAAAGGAAATTGAAGTACGAGTGGCTGCTGCTAGACTCATACAGAAAAATTCAGAGTCCCCACAATCGGCAAATGAAGGAGATAGGGATGACAGGCTGTTGGATTCCACTGCAGGATCTGGTCAGAGGATTGGTGATAGGAGGAGGCATGTGAATGCGAGGAAGAGTGGCTTTTCAGCTGAGAGGATGAAGTGGGTGCACTCATATTGGAATTCGGTTAGTATGGATATGAAGAAGGACTTTCTTAGGCTTAAAATTTGTGATCTCAAGTCGCACTATGGGTCTTTGAAGGATACTTTGCCAACTGATATCTTGTCAGAAGCTCTGTCTTATGCTGAGGTCAATAAAACATGGAAATTCTGGCCTTGCTGCAACTGTGAAGAGAAACATTCCAACCCGGATTCTCACAGGCATCATGTTGTGCAGGAACACATGGGGAGTCTTTCACCACAAATGCAGAGACTTCTGCCCCAAAATGTTGATAGTGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTCTGGATGTCCTAGCTGCAGTTAGAATGCTTGATAATAAAGCAAAGTTCAAAAGTTCATCACTTCCTGAGGATTTGTACTTGGATCATCATACTCTGGACTATAATGACTGTTTTAAAGATGCAAGTAGCTCTTACATTGAAAAGGAATGTGCAGGGGACAGTCTTCGTAATTGTTCGGTAGAGTGCAACAACCATTGTAAAGTTATAGAAAATGATTTAAGAGAAGGTGTTGAAGACCAACTATCTGTGGCTAATCCCATTATTGACTGTTGGCCAGTATCTGATGACCCTGAGCGTGCAAAACTTCTGGGGAAAATTCATGGCATTTTTGAGACTCTTATTAGGCACAAATGTCTTGCCGCTAGTCATCTTAACAAGGTCATACAGTTTACTATGGGAGAGATACAGGGTCTTGCTGCTGGTTCTCAACTTCTAAATCATGGTGTGGACCAAACTCCAATGTGCATATGCTTTCTAGGAGCTTCACAGCTTAAGACAATTTTCCAATTTCTGCAGGAAATATCTCTTGCTTGTGGATTGGCCAGAAATGCTGATAAAGGTAGTAGTAGTCCCACAAATGATTCGCTCAATATCAGTCAAGATCCTGAGATTAAGGACAAGATTGTACTTGATGAAGATGCATCATGCCTCCTACTGGATGAGTGTTTACTGCAAACACAAGTCACTGCTGGTACAGTTCAGGGGGCAGTCTTAGATGATGTGACCACCCCAAGCCCTCCTGATGGAATTTCATGCTATAACGATGCTTTGCTATCCTGGATATTTTCAAGTTCACCTATTGGGGATCAGTTGACATCGTGGCTGCGGACCAGAGAAGATAAACTAAATAAAGGAAAGGAAATTGTCCAGTTGCTTGAGAAGGAGTTTTATCATCTACAGGGCCTATGTGAGAAGAAGGGTGAGCGAATAAGTTATGAGGAAGCTCTGCAAACAGTAGAGGATCTTTGTCTTGAAGAAGGTAAGAAGAGGGAAACTGTTGGTGAATTTGTCCAGCGAAGCTATGAATCTGTCTTAAGAAAGCGAAGAGAAGAGCTCATTGAGAGTGAGAATGATATGATGTATGTAAGCAATAGGTTTGAGTTGGATGCCGTATCAAATGTTTTGCAAGAAGCAGAAGCAAGGAATGTTAATCAATTTGGCTATGATGAAACTTATGCTGGTGTGACTTCTCAGTTATGTGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGATTACTTGCATCAGATGGATGGTTCTATAGAAAATGCTATTCAGAAACTGAAAGAGCATTTATCTATTGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAGTGTTACAGAGATGCAGCAACTGGAATTCAAGCTTGGACCTATTTCTGCTAATGATTATCGAGCAATATTAGTGCCTCTAGTGAAGTCGTACCTTAGGGCTCTTTTGGAAGATTTGGCTGAGAAGGATGCAAGAGAGAAGTCTGATGCTGTAAGTGAAGCACTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGGCTGTTAAGGGGGGAAGTGAGAGCACAAGACATGTTGAGAAAACAAAAGATAAGAAGAAGAATAAAGATCACAGAAAAGCAAGAGATTTGAAGGCTACAAGTGGTCATCTGCAGTTCTCACTTGGATCAACATCTCCTGATTCCAATCTAGCTGCACCTGAAAGTGATTTCCCAGATAATGAAGTTGTTTCTATGAATGATGATGACTTGGAACAACTTGATGAGGAATTTAGACGAAAGATTGAGTTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAATTTCAACGAAGGATAGAAAATGAAGCCAAAGAGAAGCACCTTGCTGAGCAACAGAAAAAATCATCTGGGTTATACTTGGAAGGAGTGGTAGACAAACTTCAAGATTCTCAAACAAAAGCACTTCAAGATTCTCAAACAAAAGTGGATGCTGATCCACCTGATGCACATGAACATGTTGTAGTACCTTTAAAGGACCAGCTGGTAAAGGAGAATGGATCCCGAAGCAATCTGGATGGTGTGCTTACACCCACAGCAAATGGTTCCCTTGTTAATTATTTGCATCAGTCAAAAGTTAAACAATCAGGTTTGCCTAACGGAGTTGTTCCAGAGAATGGTCTAGATCGCCGTGCAGGAAAAAAACATAAACGGAAAAATTCGTCCAGACAAGTTGATGGAACATTTGAATCTGTCTCATCGGGAAAAGATAATATTGAGGATACACATTCGGATTATCACCTGAGAGAGCAATTCAAATCTAATAGCAATCAAGATGTTAATAATGTGTGGGAAAACAATGGTTCAAAGGTAAAGGTGATGGTAGAGTTGCAAGTAGAAGATGCAGAGGAAGAAAGATTTCAAGCTGATCTTAAAATGGCTGTACGCCAAAGCCTGGACACATATCAAGCTCGTGGAAATTTGCATTCAGTTTCCAGCTTAAGAATGTCCCAGAGAGCTTCTTCACAGGAAGATAGTGTGGATTCTCTGCCTGTGGAAGACTCAACTGATACTGTGAATGGGGCTATGTTGCTCGGTACTGGACTGAAGAATGAAGTGGGAGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGATCTGAGCATGATCATGTGGGTAATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTACTGCACTGGACACTGCATCAAAGGATTCTAGGAGAGAAGCAGTTGCACCTACATCCCTGCGGATAGCTCTAAGCAACCTGTATCCCCACAGTAATTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCAATCATTTACTCGTGGTTCAAGTGTTTCTGATGCTGAATCAGCTGAAAGCAACTGCACAGGGTCTTGGGATTGTGCAAATGGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTATCACTGTGGTCTTGAATCCAGACATATGAAATATACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTCAGGACAATGAAGGATACGTTTGCTGAAAGTTCCTTCGATAAGCTTTTGAATCTTGTGGAGATGAACCATCAGTTGGCTTGTGATCTAGAAGCTGATGGCTGTGGCAAGCTCAACCACATCCATCACTTTCTTTCAACTCCACCCCATGTTTTTATGACAGTCCTAGGCTGGCAAAATACATGTGAAAGTGCCGATGATATAACCGAGACTCTGGCAACCCTGAGCACCAAGATAGATATCAGTGTCCTTTATCGTGGTTTAGATCCTAAATGTACCCATAACTTGGTGTCAGTGGTTTGCTACTATGGCCAGCATTATCATTGCTTTGCTTATAGCTATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGGTAATTGGTGGATGGGCGGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 4950 0.4406 MGHKKRNPVTRSKPSTAAASPAVQSGGAANGGAISPDADNACNASDHNPHNPRKIEFAPPPPQSEGSDYSTIKLECERALTTLRRGNHTKAMKQLREICAREEGSPHSAFVHRVHSLMCFKTATVITDPNSKQRHLKNALESSRRAVELMPHSVEYAHFRATVLLEAASDAKEYEEVVQECERGLAIENPSDPAKETLQDESEQKGLTLGERIAHVQNELRQLIQKSNIASLSTWMKSLSNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLIQKNSESPQSANEGDRDDRLLDSTAGSGQRIGDRRRHVNARKSGFSAERMKWVHSYWNSVSMDMKKDFLRLKICDLKSHYGSLKDTLPTDILSEALSYAEVNKTWKFWPCCNCEEKHSNPDSHRHHVVQEHMGSLSPQMQRLLPQNVDSEWIEMILNCSWKPLDVLAAVRMLDNKAKFKSSSLPEDLYLDHHTLDYNDCFKDASSSYIEKECAGDSLRNCSVECNNHCKVIENDLREGVEDQLSVANPIIDCWPVSDDPERAKLLGKIHGIFETLIRHKCLAASHLNKVIQFTMGEIQGLAAGSQLLNHGVDQTPMCICFLGASQLKTIFQFLQEISLACGLARNADKGSSSPTNDSLNISQDPEIKDKIVLDEDASCLLLDECLLQTQVTAGTVQGAVLDDVTTPSPPDGISCYNDALLSWIFSSSPIGDQLTSWLRTREDKLNKGKEIVQLLEKEFYHLQGLCEKKGERISYEEALQTVEDLCLEEGKKRETVGEFVQRSYESVLRKRREELIESENDMMYVSNRFELDAVSNVLQEAEARNVNQFGYDETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGSIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPISANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAVSEALLAELALDSKKAVKGGSESTRHVEKTKDKKKNKDHRKARDLKATSGHLQFSLGSTSPDSNLAAPESDFPDNEVVSMNDDDLEQLDEEFRRKIELEEEEKKLEETLEFQRRIENEAKEKHLAEQQKKSSGLYLEGVVDKLQDSQTKALQDSQTKVDADPPDAHEHVVVPLKDQLVKENGSRSNLDGVLTPTANGSLVNYLHQSKVKQSGLPNGVVPENGLDRRAGKKHKRKNSSRQVDGTFESVSSGKDNIEDTHSDYHLREQFKSNSNQDVNNVWENNGSKVKVMVELQVEDAEEERFQADLKMAVRQSLDTYQARGNLHSVSSLRMSQRASSQEDSVDSLPVEDSTDTVNGAMLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRSEHDHVGNPCVVCALYEIFTALDTASKDSRREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHQSFTRGSSVSDAESAESNCTGSWDCANGSCIAHSLFGMNIFEQMNCYHCGLESRHMKYTSFFHNINASALRTMKDTFAESSFDKLLNLVEMNHQLACDLEADGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITETLATLSTKIDISVLYRGLDPKCTHNLVSVVCYYGQHYHCFAYSYDHEQWIMYDDKTVKVIGGWADVLTMCERGHLQPQVLFFEAVN 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1530 1649 MobiDBLite consensus disorder prediction 305 333 - -
Aed6g1530 1649 MobiDBLite consensus disorder prediction 186 205 - -
Aed6g1530 1649 Gene3D Tetratricopeptide repeat domain 48 223 IPR011990 GO:0005515
Aed6g1530 1649 MobiDBLite consensus disorder prediction 971 1032 - -
Aed6g1530 1649 Pfam Ubiquitin carboxyl-terminal hydrolase 1317 1625 IPR001394 GO:0004843|GO:0016579
Aed6g1530 1649 SUPERFAMILY Cysteine proteinases 1316 1646 IPR038765 -
Aed6g1530 1649 Gene3D Cysteine proteinases 1307 1647 - -
Aed6g1530 1649 MobiDBLite consensus disorder prediction 295 333 - -
Aed6g1530 1649 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1649 - -
Aed6g1530 1649 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1649 - -
Aed6g1530 1649 MobiDBLite consensus disorder prediction 1005 1020 - -
Aed6g1530 1649 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1316 1648 IPR028889 -
Aed6g1530 1649 MobiDBLite consensus disorder prediction 1 68 - -
Aed6g1530 1649 Coils Coil 1035 1076 - -
Aed6g1530 1649 MobiDBLite consensus disorder prediction 1282 1303 - -
Aed6g1530 1649 Pfam Protein of unknown function (DUF627) 78 189 IPR006866 -
Aed6g1530 1649 Pfam Protein of unknown function (DUF629) 348 882 IPR006865 -
Aed6g1530 1649 MobiDBLite consensus disorder prediction 1164 1210 - -
Aed6g1530 1649 CDD Peptidase_C19 1407 1646 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1530 58 1646 C2H2 Transcription Factor Family AT3G47890 55.632 0.0 1666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1530 6 19507180 19517168 Aed6g1530 6 19507180 19517168 ECH