Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1529 ATGACCCTTAAGGGTGGCACAGCCCAAGCCTGTGCGGCATGCAAACACCAGAGAAGAAAGTGCACTTCTGAGTGCGTTCTCGCACCTTACTTTCCCTCAGACCAACCCAAGGTTTTTCTCAACGTCCACAAGCTTTTCGGAGTCAGCAACATCGTTAAGATTCTCAAGATTTTGGGCCCTAGTCACAAGAAAATTGCCATGGACACCATCATCATTCAAGCCAATTACAGAGAAAAGTACCCTGTGCATGGCTGTTGGGAAGAAATTTATAAGCTTCATTACCAAATATGGCTCGTGGTAGAAGAGCTTCGTGCAGTTTATCAACATCTTCATATATGCAAACAACAACAAGCTCCTTCTTCCATGCATGATGATGTCACTTCACAATTAGAATTGTGCATGGCACCATGTACTACTCCACAACAACAACACACTACTACTTACAACAACGTGGATGCTGTGTCACAGCAACATTCTTACTCCAGCAGCAACAGCAACAGCGTGGATTATAACTCCCTCTGCTACTTGGATTCCAAGGATGATAATACAAATAATAATATTATTCCTAATTTGTGGGAGGTTCATCATGATGATGAGTACGACCACTATGCAAATAACAATAGTGACGATTCTGTGGAAATTGATATGCAAACTCAGTTGTTGGTTTCCTCGCAGCAACCACTAGCCATCCAACAAAATATTGTTGATGATTATGTTGATGAGATGCCTCCAATTTTTGATTCAGTTGATGATAGGCAATCGCACATTTATTCCAAGGAGGCTTGA 786 0.4186 MTLKGGTAQACAACKHQRRKCTSECVLAPYFPSDQPKVFLNVHKLFGVSNIVKILKILGPSHKKIAMDTIIIQANYREKYPVHGCWEEIYKLHYQIWLVVEELRAVYQHLHICKQQQAPSSMHDDVTSQLELCMAPCTTPQQQHTTTYNNVDAVSQQHSYSSSNSNSVDYNSLCYLDSKDDNTNNNIIPNLWEVHHDDEYDHYANNNSDDSVEIDMQTQLLVSSQQPLAIQQNIVDDYVDEMPPIFDSVDDRQSHIYSKEA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1529 261 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Aed6g1529 261 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 226 - -
Aed6g1529 261 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
Aed6g1529 261 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1529 Aed-Chr6 19505275 19506060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1529 1 261 AS2 family AT3G47870 34.853 1.99e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed6g1529 LOB 3.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1529 - - lang:109357116 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1529 6 19505275 19506060 Aed6g1529 6 19505275 19506060 ECH