Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1510 ATGGTGTCGACGTTCGACAAAAAGAAGAACTTGAGCAATCTGACAATCCCTTCTTCTTCTTCCTCCCCGAATTCATCTCCATCAAGCCCCCACGTCATCCACAGTAGGTCCCACTCCTTCGTGGGCCCCTCTCCTCGCTTCGCTCCTCCCTCTACCCCTCTCTTCTTCCTCGACGACCTCGAAGAAGAAGTAGCAGAACCTCTTGGTCCCGATTCCCCTAATAAGATATGTCCTTCCGATTTCCATATACTGCGTGTTGTAGGACAGGGTGCCTTTGGAAAGGTCTTTCTCGTCCGAAAAAAAGGTGACGATTGCGATGGCGATGGTGTCTTCGCCATGAAGGTGATGAGGAAGGACACCATCATTAAAAAAAACCACGTCGATTACATGAAAGCCGAGAGGGATATTCTCACCAAAATCCTTCACCCTTTCATCGTTCAGCTTCGTTACTCTTTCCAGACCAATTCTAAGTTATATTTGGTGTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATTTGTATCGCCAGGGTTTATTCAGTAGTGAGGATCATGCAAGGCTTTACGCTGCTGAGATAGTGTCTGCTGTTTCACACCTTCACAACAATGGCATCGTGCATCGCGATCTTAAACCTGAAAACATTCTTATGGATTCTGATGGGCATGTCATGCTAACTGATTTTGGACTGTCAAAAGAGATTGATGAATTGGGAAGATCCAACTCTTTTTGTGGGACTGTTGAATATATGGCTCCTGAAATCCTACTGGGTAAAGGCCATAACAAGGATGCAGATTGGTGGAGTGTTGGTATTCTGTTGTATGAAATGCTAACAGGGAAGGCACCTTTTACACACAATAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTTACCAGTGAGGCTCACTCTTTGCTCAAAGGATTGCTGCACAAGGATCCATCAACAAGGTTAGGCAATGGGCCAAATGGAGATGACCAAATCAAAAATCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTAGAGGCAAGAGAACTGGAACCAAAGTTTAAACCAGATGTGGTGGGAAAAGATTGTACAGCTAATTTTGACCAATGCTGGACAGCAATGCCTGCTGATGACTCGCCAGCACCCACACCTACCGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCATCTCGCTCACTAGAATGA 1242 0.4452 MVSTFDKKKNLSNLTIPSSSSSPNSSPSSPHVIHSRSHSFVGPSPRFAPPSTPLFFLDDLEEEVAEPLGPDSPNKICPSDFHILRVVGQGAFGKVFLVRKKGDDCDGDGVFAMKVMRKDTIIKKNHVDYMKAERDILTKILHPFIVQLRYSFQTNSKLYLVLDFINGGHLFFHLYRQGLFSSEDHARLYAAEIVSAVSHLHNNGIVHRDLKPENILMDSDGHVMLTDFGLSKEIDELGRSNSFCGTVEYMAPEILLGKGHNKDADWWSVGILLYEMLTGKAPFTHNNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLHKDPSTRLGNGPNGDDQIKNHKWFRSINWKKLEARELEPKFKPDVVGKDCTANFDQCWTAMPADDSPAPTPTAGDHFQGYTYVAPNPWLSSRSLE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1510 413 SMART serkin_6 81 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1510 413 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 409 - -
Aed6g1510 413 MobiDBLite consensus disorder prediction 1 35 - -
Aed6g1510 413 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 410 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed6g1510 413 ProSitePatterns Protein kinases ATP-binding region signature. 87 114 IPR017441 GO:0005524
Aed6g1510 413 Gene3D Transferase(Phosphotransferase) domain 1 165 361 - -
Aed6g1510 413 Pfam Protein kinase domain 81 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1510 413 SUPERFAMILY Protein kinase-like (PK-like) 69 386 IPR011009 -
Aed6g1510 413 MobiDBLite consensus disorder prediction 1 41 - -
Aed6g1510 413 PANTHER RIBOSOMAL PROTEIN S6 KINASE 17 409 - -
Aed6g1510 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Aed6g1510 413 ProSiteProfiles Protein kinase domain profile. 81 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1510 413 Gene3D Phosphorylase Kinase; domain 1 79 384 - -
Aed6g1510 413 Pfam Protein kinase C terminal domain 366 400 IPR017892 GO:0004674|GO:0005524|GO:0006468
Aed6g1510 413 SMART pkinase_C_6 343 402 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed6g1510 413 CDD STKc_AGC 87 342 IPR045270 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1510 Aed-Chr6 19331560 19349854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1510 30 403 AGC Kinase Gene Family AT3G08720 61.443 6.05e-169 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Aed6g1510 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1510 K04688 - gmx:100798259 721.465