Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1508 CCTTCATTCTTCTCTCTTCCTCTCACCGAGTCACGCATTCGCTTGGACTCGTACGAACTCCGATTCTCCCCGAGTCACACTCAACCAGCACCACCCCACGATCCGACGATGTCTCGTGCCTGCGCCGCCGCTGACTCCGCTTCCTCCGGCGAGATCATGCTGTTCGGAGTCAGAGTCGTAGTCGATTCGATGAGGAAGAGCGTCAGCATGAACAACCTCTCACAGTACGAGCAAACTCAAGACGCCAACAACAACAACAACAATAAAGACGCTCTCGCCGCCGGATACGCCTCCGCCGACGACGCCGCTCCTCACAACTCCGGCCGTCAACGTGAGCGCGAGCGAAAGCGAGGTGTTCCGTGGACGGAGGAAGAGCACAAGCTGTTTTTGGTTGGATTGCAGAAGGTAGGAAAAGGTGATTGGAGAGGAATCTCCAAAAACTACGTCAAAACGCGAACTCCGACTCAGGTTGCGAGCCATGCTCAGAAGTACTTTCTCCGCCGAAGCAACCTCAATCGCCGTCGCCGTAGATCCAGCCTCTTCGATATCACCACCGACACGGTGTCTGCAATTCCAATGGAGGAAGAACAGGTCCAGAATGAAGATACCGTGTCTCATTCACAAGCTGGGTTTCCAATGATGATGCCAGTGTATCATCAGTTTGGGGTTAGTCCTGGAGTGATTTCAGTCCAAGGTGGAAACCCAATAGAAGAACTCACTCTGGGACAAGGAAACGTGGAAAAACAGAATGTGTCTGATATCATCACCCCTAGTTCTTCTAGTTCTGCCGTTGACCCACCGACACTGTCCCTGGGGCTATCCTTCTCATCTGACCAAAGGCAAACATCATCAAGACATTCAGCTTTACATGCCATACAATGTTTCAGCAATGGAGAAAGCATCATTAGTGTTGCTTGA 918 0.5174 PSFFSLPLTESRIRLDSYELRFSPSHTQPAPPHDPTMSRACAAADSASSGEIMLFGVRVVVDSMRKSVSMNNLSQYEQTQDANNNNNNKDALAAGYASADDAAPHNSGRQRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQVQNEDTVSHSQAGFPMMMPVYHQFGVSPGVISVQGGNPIEELTLGQGNVEKQNVSDIITPSSSSSAVDPPTLSLGLSFSSDQRQTSSRHSALHAIQCFSNGESIISVA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1508 305 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Aed6g1508 305 CDD SANT 120 165 IPR001005 -
Aed6g1508 305 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Aed6g1508 305 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 45 305 - -
Aed6g1508 305 SMART sant 117 167 IPR001005 -
Aed6g1508 305 PANTHER KIN2 45 305 - -
Aed6g1508 305 SUPERFAMILY Homeodomain-like 115 170 IPR009057 -
Aed6g1508 305 MobiDBLite consensus disorder prediction 105 120 - -
Aed6g1508 305 MobiDBLite consensus disorder prediction 99 120 - -
Aed6g1508 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 169 IPR017930 -
Aed6g1508 305 ProSiteProfiles SANT domain profile. 116 169 IPR017884 -
Aed6g1508 305 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 167 IPR006447 GO:0003677
Aed6g1508 305 Gene3D - 119 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1508 Aed-Chr6 19316303 19318366 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed6g1508 Myb_DNA-binding 3.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1508 - - gmx:780536 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1508 6 19316303 19318366 Aed10g0995 10 8733904 8737106 PCT