Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1501 ATGGATTTGCAAAGATCTCTCAGATTTGGATCCTCCGAATCTATCGCCTTTATTATTTTTCTTTTCCATTTATTTATTACGCCTCCCTCTTTCTTTCTCTCTCTCCTTTCACCCCATGTAAATAAAACCCACCATTTCCGTGTACTTTGCCACTTTCTATTTCTATTCTCAGAACAAGACTCACTTACTAATTGTGTAGAGAGAGAGAGAGAGAGAGTTCGTATTCTCATTCTCAAAGTCATGGCTATTACCGGCGAGATTTTCCGGGAAATGCTTCAGGAGTCCCCTTCCGGTGCGACGGAGCTTCACGTTCTCGCCGTCGATGACAGTCTCGTTGATCGCAAGGTGATTGAGCGCTTGCTGAAGATTAATTCCTGCAAAGTGACGGTTGTGGATAGTGGAACGCGCGCTCTTCAGTATTTGGGGTTGGACGGAGATAACGGTTCTCTCGGGTTTGATAGTGCTAAGGTTAATCTCATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGCAGGAGTCTTCTGTGTTTAGAGAGATTCCGGTGGTGATCATGTCCTCGGAGAATGTTTTGACCCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTAACATTGTCAGATGTAAGGCGCTTAACAGATTTCATCATGAAAGGGAAAGTGAAGGAAGGGGAGAAAATAATATCACACAAAAGAATGCGGTCAATTGATTGCAGTCAACCTCTATCTGCAACATGCTCAACATGCTCACCAATGTCTCTTCCATGCGATCCATCACCATCATTACTCTCACCATTATCCTCAAAGAAGGCTAGATTGTGA 864 0.4375 MDLQRSLRFGSSESIAFIIFLFHLFITPPSFFLSLLSPHVNKTHHFRVLCHFLFLFSEQDSLTNCVERERERVRILILKVMAITGEIFREMLQESPSGATELHVLAVDDSLVDRKVIERLLKINSCKVTVVDSGTRALQYLGLDGDNGSLGFDSAKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEEFLLKPVTLSDVRRLTDFIMKGKVKEGEKIISHKRMRSIDCSQPLSATCSTCSPMSLPCDPSPSLLSPLSSKKARL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1501 287 PANTHER TWO-COMPONENT RESPONSE REGULATOR 84 287 IPR045279 GO:0009736
Aed6g1501 287 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 84 287 - -
Aed6g1501 287 SUPERFAMILY CheY-like 101 238 IPR011006 -
Aed6g1501 287 ProSiteProfiles Response regulatory domain profile. 103 231 IPR001789 GO:0000160
Aed6g1501 287 Gene3D - 102 254 - -
Aed6g1501 287 Pfam Response regulator receiver domain 104 224 IPR001789 GO:0000160
Aed6g1501 287 SMART REC_2 102 227 IPR001789 GO:0000160
Aed6g1501 287 CDD REC_typeA_ARR 104 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1501 Aed-Chr6 19248420 19251115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1501 102 246 Response Regulator Gene Family AT3G48100 76.027 9.13e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed6g1501 Response_reg 1.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1501 K14492 - gmx:100796843 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0987 10 8674105 8676123 Aed6g1501 6 19248420 19251115 ECH
Aed6g1501 6 19248420 19251115 Aed6g1501 6 19248420 19251115 ECH