Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1484 ATGGGAGTGAGACGCAAGTTGGTGGAATGGAGTCCATTGATAGCGATGGTGAGTATTGAGTGCCTTGGCGTGGGTGTGTCCACGTTGAGTAAAGCAGCGATGTCGAGAGGAATGAACAACTTTGTCTTTGTTGTCTACTCCAATGCTCTTGCAACTCTCTTTCTCATCCCTTCTTCTTTCTACATTCACAGAACAGCACCACCCCTTTCTTTCTTGCTTCTCTGCAAGTTCTTCCTCCTCGGCATTCTTGGCATAACTATCAGCCAGAATTGTGTTTTCGTCGGCATTGACTACAGCTCTCCCACTCTTGGATCCGCTATAGCTAACATATCTCCGGCAATCACTTTTGTGCTAGCGGTTACCCTCAGGATGGAGAAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTCATGGGTGTAGTGCTGTCCATCTCTGGAGCATTAGTGGTGACCCTTTACAAGGGCAGTTCCATCACCATCTTGTTGGCTGAAACCAGTAACAGTAACTGGCTCATTGGGGGTCTCTTCTTTGCCGCTGCCTCCTTTTCTGTGGCAGCCTGGGGTATTATTCAGACCACTAAGCCTTGTTTGCACTTGCAGGCAGTAATTCTGAAGGGATATTCATCTCAGATAACCTTAGTAGCCTACTGTTGCTTGTTTGGAACCATCCAATGTGCAATAATTTCTCTCATTCTAAGATCTCTAAATGCTTGGAAAATTAGCACTGGCATTGAGCTTATCTGTATATTCTATTCAGTAAGCACTATCATTGGTGCTGTGATCATTGCCATCGGATTTTACACTATTGTGGGCATAATCAAAAGACGGAAATGCAAAGCCTCTCGAACTCTCTACCATAGTGGCCAAGCTCTTCAGGAGAAACAGCAGAAAGAAAGACTAACACAAAGCATACCTGAGAGACCACAACAAGTTGTTCATCTGGTGATTGTGGCATCGAATGCAGCAGTTTATCCAAAAGCTTGA 987 0.4478 MGVRRKLVEWSPLIAMVSIECLGVGVSTLSKAAMSRGMNNFVFVVYSNALATLFLIPSSFYIHRTAPPLSFLLLCKFFLLGILGITISQNCVFVGIDYSSPTLGSAIANISPAITFVLAVTLRMEKLNIGSSISQIKVMGVVLSISGALVVTLYKGSSITILLAETSNSNWLIGGLFFAAASFSVAAWGIIQTTKPCLHLQAVILKGYSSQITLVAYCCLFGTIQCAIISLILRSLNAWKISTGIELICIFYSVSTIIGAVIIAIGFYTIVGIIKRRKCKASRTLYHSGQALQEKQQKERLTQSIPERPQQVVHLVIVASNAAVYPKA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1484 328 PANTHER WAT1-RELATED PROTEIN 9 254 IPR030184 GO:0016021|GO:0022857
Aed6g1484 328 PANTHER WAT1-RELATED PROTEIN 9 254 - -
Aed6g1484 328 Pfam EamA-like transporter family 22 152 IPR000620 GO:0016020|GO:0016021
Aed6g1484 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1484 Aed-Chr6 19133135 19135972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1484 12 253 Nodulin-like Gene Family AT5G40240 41.313 2.99e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1484 - - ccaj:109809148 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0221 11 1835337 1838245 Aed6g1484 6 19133135 19135972 ECH
Aed6g1484 6 19133135 19135972 Aed6g1484 6 19133135 19135972 ECH