Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1476 ATGGTGGTAAGATCGTGCTCAAATTTGTCCGACTTGGTGTCTGAGGAAAGTTTGAATTCTCCTCAAACTCCTGGAGCTTTTCCCCGATGCCTGTCTGATTCAGGAATCATTTCTGATGTGGATGGCAAACTAAGGGACAATGGTGATTCAAATGCTTTCTCATCAGAACTCCTGCAGAAGAAGATCATTATAGTAGCAAATTTTCTTCCTCTCAATGCTCAAAAGGATAATATATCTGGCAAATGGTGCTTCACTTATGATGAAGATTCAATCTTGTTGCCGTTGAAGGATGGCCCCTCTTTTGACACTGAGGTTCTTTATGTGGGATGTCTGAAGGTTGATGTTGATGCTAGCGAACAAGAGAAAGTTTCTCTTCAGCTACTGAAGGAATTCAATTGCTTGCCTACCTTTATTCCTTCAAACACCCAGAAACAATTTTACAATGGATTCTGCAAGCAACATTTGTGGCCTCTGTTCCATTATATGTTGCCCTTGTATCCAGACTACTGCAATCGCTTTGACAAGTCACTGTGGCAAGCTTATGTTTCTGCTAACAAATTATTTGCTGATAAAGTCATGGAGGTTATGAATCCAGAGCATGATTATGTATGGGTTCATGATTATCATCTTATGGTTGTTCCAACATTTCTACGGAAGAGATACAGTTGGATCAAGATAGGATTTTTCCTCCACTCTCCATTTCCTTCATTGGAAATTTATCGAGCACTACCTGTCAGGGATGAAATTCTGAGAGCACTGCTTAATGCAGATTTAATTAGCTTTCATACATTTGATTACGCTCGCCACTTTCTTTCCTGCTGCAGTCGAATTCTTGGCTTAGAATATGAATCCAAAAGGGGTTACATAAAGCTTGAATACTTTGGCCGTAAAGTATTCATTAAAATCTTGCCTGTAGGGATTCATATGGATCGACTTCAATCTGCCTTGAATCACCCTTCTTTTTCAGCCAATGTCAGAGAAATGTGGGAGAAGTACAAGGGGAAAAAACTTATTCTTGGAGTTGATGATATGGACATTTTTAAAGGTATCAGCCTAAAGCTTTTGGCCATAGAGCATCTTCTTCAGCAATATCCTGAATTGTTGGGTGAATTAATACTCGTCCAGATTGTAAATCCAGCAAGGAGTACTGGTAAGGATGTAGAGGAGGCAAGGAAAGAGATGCACATTATTGCCAACAGGATAAATGAAAGGTTTCGTTCGCCAGATTATGAACCTGTCATCATCATCAATCGTCATGTCCCGTTATATGAGAAGACATCCTACTATGCTTTAGCAGAATGTTGCATTGTGAATGCAGTGCGGGATGGTATGAATTTGGTTCCTTACGATTACATTGTCTGCAGGCAGGGGAATCCTAAAATGGATGAAGCTTTAGGAATTGGTTCTTCTGAGTCACCTCGTACAAGTGCACTTGTTGTTTCTGAGTTTATAGGTTGCTCACCTTCTCTTAGTGGGGCAATCAGGGTAAACCCATGGGACATTAATGCTGTAGCTGATGCACTGAATTTGGCCATCACAATGTCCAGTGGAGAGAAACAGTTGCGGCATGAGAAGCACTATCGATACATTAGCTCTCATGATGTATTTTACTGGGCCAAAAGTTTTGTGCAAGATCTTGAGTATTCATGCCAGGATCACTATAATAAGAATCGCTGGGGGATTGGCTTTGGCCTTAATTTCAGAGTTTTGTCCCTTTCTCCTACTTTCGGGAAGCTTAACAAAGAGCATGCTGTTTTTGCATATGAAAGGACAAATTGCAGGGCATTGTTTTTGGATTATGATGGAACAGTTGTGCCTTCCATTGTTAAAACTCCGAGTCCTAAAATAATAGATGTTCTAAATATCCTTTGTAGTGACCCTAAGAACACTGTGTTTATAGTAAGTGGCAGGGGGAAAACCATGCTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGTCATGCTTCAAAGAAGCAGTTTACAGTTTGATTTTCAAGATTTGATTATAGAGGAAACTGTGGCATTAAGTTTTAGACGGTGA 2058 0.4018 MVVRSCSNLSDLVSEESLNSPQTPGAFPRCLSDSGIISDVDGKLRDNGDSNAFSSELLQKKIIIVANFLPLNAQKDNISGKWCFTYDEDSILLPLKDGPSFDTEVLYVGCLKVDVDASEQEKVSLQLLKEFNCLPTFIPSNTQKQFYNGFCKQHLWPLFHYMLPLYPDYCNRFDKSLWQAYVSANKLFADKVMEVMNPEHDYVWVHDYHLMVVPTFLRKRYSWIKIGFFLHSPFPSLEIYRALPVRDEILRALLNADLISFHTFDYARHFLSCCSRILGLEYESKRGYIKLEYFGRKVFIKILPVGIHMDRLQSALNHPSFSANVREMWEKYKGKKLILGVDDMDIFKGISLKLLAIEHLLQQYPELLGELILVQIVNPARSTGKDVEEARKEMHIIANRINERFRSPDYEPVIIINRHVPLYEKTSYYALAECCIVNAVRDGMNLVPYDYIVCRQGNPKMDEALGIGSSESPRTSALVVSEFIGCSPSLSGAIRVNPWDINAVADALNLAITMSSGEKQLRHEKHYRYISSHDVFYWAKSFVQDLEYSCQDHYNKNRWGIGFGLNFRVLSLSPTFGKLNKEHAVFAYERTNCRALFLDYDGTVVPSIVKTPSPKIIDVLNILCSDPKNTVFIVSGRGKTMLSEWFDQCENLGIAAEHVMLQRSSLQFDFQDLIIEETVALSFRR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1476 685 SUPERFAMILY HAD-like 594 658 IPR036412 -
Aed6g1476 685 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 671 IPR001830 GO:0003824|GO:0005992
Aed6g1476 685 CDD GT20_TPS 61 547 IPR001830 GO:0003824|GO:0005992
Aed6g1476 685 Gene3D Glycogen Phosphorylase B; 315 531 - -
Aed6g1476 685 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 549 - -
Aed6g1476 685 Pfam Trehalose-phosphatase 597 662 IPR003337 GO:0003824|GO:0005992
Aed6g1476 685 Pfam Glycosyltransferase family 20 61 547 IPR001830 GO:0003824|GO:0005992
Aed6g1476 685 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 671 - -
Aed6g1476 685 Gene3D Glycogen Phosphorylase B; 53 314 - -
Aed6g1476 685 Gene3D - 593 681 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1476 Aed-Chr6 19088838 19091874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1476 1 671 Trehalose Biosynthesis Gene Families AT1G23870 66.270 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1476 K16055 - gmx:100808800 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0963 10 8351530 8358121 Aed6g1476 6 19088838 19091874 ECH
Aed6g1476 6 19088838 19091874 Aed6g1476 6 19088838 19091874 ECH
Aed6g1476 6 19088838 19091874 Aed10g0963 10 8351530 8358121 PCT