Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1471 ATGGCAGCTCGCAGACTTTCCTGGCTACTCTCTCTCTCTCTCTCTGCTTCCCATTCTTCTCTGCTTCACTCACTGGAATGTATTCTTCAATTCATTACCCCAGGAAGAAACTCTGGAGGGTGGAGAAACATTAACAGATTTAGCACGGTTGCAACAGTTGAGGAACTAATCACCCCACAAGTTCCAATACGAGAAGTGATTGCTAAAGTTGCTGAAGGGGATGTTGAAGACATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCTAAAATGACTGCATATGAAAGAAGTAGGATAATGCTGCGCTTTGCTGATTTGGTTGAGAAACACATCGATGAGCTTGCTGCTCTGGAGACATGGAACAATGGAAAGACTTATGAACAGGCTGCCAAGGTTGAATTGCCAATATTTGTGCGTTGGGCAGATAAAATTCATGGGCTGACAGTCCCAGCTGATGGAGATTATCATGTTCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTCTAGTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTCAAGACTGCTGAGCAAACACCACTAACAGCTCTCTTTGCGGCTAAACTATTTCATGAGTTGCATTGTGTTTCCCAAGATAATCTTCTCCTTTTTGCTCAGGCTGGTCTTCCTGAAGGTGTTCTGAATGTAGTTTCCGGGTATGGTCCAACTGCTGGTGCAGCTCTTGCAACATTCACTGGCTCAACAGATACTGGAAAAGTTGTACTAGAATTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTCGGAGGGAAATCGCCTTTCATAGTGTGCGAGGATGCTGATGTTGACAAGGCTGTTGAAATTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGCTGTGCGGGGTCTCGTACCTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGGCGTGTTGTTGGTGATCCATTCAAGAAAGGTGTTGAACAAGGTCCTCAGATTGACGTGGAACAATTTGAGAAAGTCCTAAGGTACATAAGGTCTGGAATCGAAAGCAATGCCACCCTTGAATGTGGGGGTGATAGATTGGGCTCAAAAGGCTTCTTTGTCCAGCCAACTGTCTTCTCAAATGTTCAGGATGACATTCTGATAGCACAAGACGAAATCTTTGGCCCAGTTCAGACCATCTTGAAATTCAAGGACATTGATGAAGTAATACGTCGAGCAAATAAAACACGTTATGGTCTAGCAGCAGGTGTGTTTACTAAGAACGTGAACTCGGCGAACACATTGATGCGGGCACTGAGAGCTGGAACTGTGTGGATTAATTGCTTTAATGTTTTTGATGCTGCAATTCCTTTTGGTGGATCCAAGATGAGTGGTTTTGGCAGGGAAAAAGGAATCTACAGCCTTCACAACTACCTTCAGGTGAAAGCTGTTGTCTCACCACTGAACAATCCTACATGGCTATAA 1557 0.4444 MAARRLSWLLSLSLSASHSSLLHSLECILQFITPGRNSGGWRNINRFSTVATVEELITPQVPIREVIAKVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERSRIMLRFADLVEKHIDELAALETWNNGKTYEQAAKVELPIFVRWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHELHCVSQDNLLLFAQAGLPEGVLNVVSGYGPTAGAALATFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDKAVEIAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDVEQFEKVLRYIRSGIESNATLECGGDRLGSKGFFVQPTVFSNVQDDILIAQDEIFGPVQTILKFKDIDEVIRRANKTRYGLAAGVFTKNVNSANTLMRALRAGTVWINCFNVFDAAIPFGGSKMSGFGREKGIYSLHNYLQVKAVVSPLNNPTWL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1471 518 Pfam Aldehyde dehydrogenase family 64 508 IPR015590 GO:0016491
Aed6g1471 518 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 64 518 - -
Aed6g1471 518 SUPERFAMILY ALDH-like 64 513 IPR016161 GO:0016491
Aed6g1471 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 508 IPR016162 GO:0016491
Aed6g1471 518 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 284 291 IPR029510 GO:0016491
Aed6g1471 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 290 479 IPR016163 GO:0016620
Aed6g1471 518 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 64 518 - -
Aed6g1471 518 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1471 Aed-Chr6 19069321 19072917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1471 1 518 Aldehyde Dehydrogenase Gene Family AT3G48000 68.984 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1471 K00128 - gmx:100811501 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0960 10 8325638 8330871 Aed6g1471 6 19069321 19072917 ECH
Aed6g1471 6 19069321 19072917 Aed6g1471 6 19069321 19072917 ECH