Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1468 ATGAAGGAAAGCAGTGATGGGTTTGTTAGAGCGGATCAGATTGATCTGAAGAGCATAGATGAACAGTTGGAGAGGCACCTCAGCAAGGTGTTGACTATAGAGAAGAAAAAGCGCTCTGAAGAGGAAGACGATAATATTGCTTCTGATCATCATCATCATCTTCATGTTAACCATCACACCACAAGCAGCGCCACTGCTTCTCCCAAATTCTCACAGCATGCTAGGTCTGCGAACTTCAAGAAGAAAAAACAGGACTGGGAGATTGATCCTTCTAAACTCATCATCAAAACTGTTATAGCTCGTGGCACTTTCGGCACTGTCCATCGTGGTGTCTATGATACCCAAGATGTTGCTGTGAAATTGTTGGACTGGGGAGAAGAAGGACAAAGGACTGAAGCAGAAATTTCCTCCCTGAGGGCAGCGTTTACACAGGAAGTTGCTGTTTGGCATAAACTTGATCACCCCAATGTCACAAAGTTTATAGGGGCAACAATGGGGTCTTCAGAATTGCAGATACAAACTGATACTGGTCTAATTGGCATGCCAAGCAATGTCTGTTGTGTTGTTGTTGAGTATCTTGCTGGAGGCAATCTGAAACAATACCTAATAAAGAACAGGAGGAGGAAGTTAGCTTTTAAAGTTGTCATCCAGATTGCACTTGACCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTCGAGGCATCAAATCCTAATGATATGACTGGGGAGACTGGCACTCTTGGTTATATGGCTCCAGAGGTTTTAAATGGCAACCCCTACAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACTTCAGCTGTTGTTCGCCAGAATTTAAGACCAGAAATGCCAAGATGTTGCCCAAGTTCTCTGGCAAATGTAATGAAGAAGTGCTGGGATGCGACTCCGGATAAGCGGCCAGAGATGGATGAGGTAGTTTCCATGCTGGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTCATGATCAGCAGCAGGGTTGTTTTTGCTTCCGCAAGCATAGAGGGCCTTGA 1191 0.4408 MKESSDGFVRADQIDLKSIDEQLERHLSKVLTIEKKKRSEEEDDNIASDHHHHLHVNHHTTSSATASPKFSQHARSANFKKKKQDWEIDPSKLIIKTVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEISSLRAAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDTGLIGMPSNVCCVVVEYLAGGNLKQYLIKNRRRKLAFKVVIQIALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEMPRCCPSSLANVMKKCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPHDQQQGCFCFRKHRGP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1468 396 Gene3D Phosphorylase Kinase; domain 1 81 176 - -
Aed6g1468 396 Pfam Protein tyrosine and serine/threonine kinase 95 367 IPR001245 GO:0004672|GO:0006468
Aed6g1468 396 PRINTS Tyrosine kinase catalytic domain signature 190 203 IPR001245 GO:0004672|GO:0006468
Aed6g1468 396 PRINTS Tyrosine kinase catalytic domain signature 294 316 IPR001245 GO:0004672|GO:0006468
Aed6g1468 396 PRINTS Tyrosine kinase catalytic domain signature 338 360 IPR001245 GO:0004672|GO:0006468
Aed6g1468 396 PRINTS Tyrosine kinase catalytic domain signature 228 246 IPR001245 GO:0004672|GO:0006468
Aed6g1468 396 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 390 - -
Aed6g1468 396 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1468 396 SUPERFAMILY Protein kinase-like (PK-like) 72 367 IPR011009 -
Aed6g1468 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Aed6g1468 396 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1468 396 PIRSF TyrPK_CSF1-R 18 122 - -
Aed6g1468 396 PIRSF TyrPK_CSF1-R 191 378 - -
Aed6g1468 396 Gene3D Transferase(Phosphotransferase) domain 1 194 385 - -
Aed6g1468 396 MobiDBLite consensus disorder prediction 59 74 - -
Aed6g1468 396 MobiDBLite consensus disorder prediction 56 76 - -
Aed6g1468 396 CDD STKc_MAP3K-like 99 367 - -
Aed6g1468 396 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1468 Aed-Chr6 19054675 19059835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1468 1 328 MAP Kinase Kinase Kinase AT5G50000 77.439 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed6g1468 PK_Tyr_Ser-Thr 2.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1468 - - gmx:100807921 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0957 10 8293495 8298133 Aed6g1468 6 19054675 19059835 ECH
Aed6g1468 6 19054675 19059835 Aed6g1468 6 19054675 19059835 ECH