Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1462 ATGGAAACAAAGAATTGGAAAGGGGTCATCATCAACCTGACCCTGTTTGTCTCCTCTCTAGTATATCTTCGCACGAACGATAATATAATAACAACAACTCCATCTGGTGTACACAACAACACAAGAAATATCCAACAACGTGAGATCAGGGAGAAGGCTTTCACTAGGGAATACAAGAGGGCAGTGTCATGGTCAAAGTATTTGGTTTCTTCTGGGGCTGCCATAAAGGGAGAGGGAGAAGAAGAATGGAGTGCTGATCTTTCTCAGTTGTTCATAGGTTCCAAATTTGCCTCTGGAAGGCATAGCAGGATCTACAGAGGCATCTACAAGCACATGGATGTTGCTATTAAGCTTGTGAGTCAACCTGAGGAGGATGAGGAGTTGGCTGTTTTGCTTGAGAAGCAATTCACTTCTGAGTTTGTTGCAGCTTGCAAGAAACCTCCAGTGTTCTGTATAATTACTGAATACTTGTCTGGGGGTTCCTTGAGAAAGTACTTGGTTCAGGAAGGGCCACATTCAGTTCCTCACAACATTGTTCTGAAATTAGCCTTAGACATAGCAAGGGGAATGCAATACCTTCATTCTGAGGGTATACTTCACAGGGATCTCAAATCAGAAAACCTGCTTTTGGGGGAAGATTTGTGCGTAAAAGTAGCAGATTTTGGGATCTCATGCTTGGAATCTCAGACAGGAAGTTCAAAAGGATTCACTGGAACATACCGTTGGATGGCACCTGAAATGATCAGAGAACAGCGTCACACCAAGAAAGTTGATGTCTATAGTTTCGCCATAGTTCTTTGGGAAATCCTAACGGGATTGACTCCATTTGATAATATGACACCAGAGCAGGCAGCATATGCTGTCACTCATAAGAATGCAAGGCCTCCATTGCCATGTGACTGTCCAAAGGCATTTAGTCATCTCATGAACAGATGCTGGTCAAGCAATCCAGATAAAAGGCCACATTTTGATGAGATAGTTGCAATTTTGGAGAGCTACACTGAAGCACTTGATGAAGATCCTGAATTTTTCTCTACTTACAAACCACGTCCTAATAATATAATTCTCAGATGCTTGTCAAAGTGTAATAATTTATTTGCTTCTTGCAAAGCTTAG 1116 0.4194 METKNWKGVIINLTLFVSSLVYLRTNDNIITTTPSGVHNNTRNIQQREIREKAFTREYKRAVSWSKYLVSSGAAIKGEGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEELAVLLEKQFTSEFVAACKKPPVFCIITEYLSGGSLRKYLVQEGPHSVPHNIVLKLALDIARGMQYLHSEGILHRDLKSENLLLGEDLCVKVADFGISCLESQTGSSKGFTGTYRWMAPEMIREQRHTKKVDVYSFAIVLWEILTGLTPFDNMTPEQAAYAVTHKNARPPLPCDCPKAFSHLMNRCWSSNPDKRPHFDEIVAILESYTEALDEDPEFFSTYKPRPNNIILRCLSKCNNLFASCKA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1462 371 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672|GO:0006468
Aed6g1462 371 PRINTS Tyrosine kinase catalytic domain signature 238 248 IPR001245 GO:0004672|GO:0006468
Aed6g1462 371 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Aed6g1462 371 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672|GO:0006468
Aed6g1462 371 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672|GO:0006468
Aed6g1462 371 Gene3D Phosphorylase Kinase; domain 1 78 158 - -
Aed6g1462 371 ProSiteProfiles Protein kinase domain profile. 90 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1462 371 Pfam Protein tyrosine and serine/threonine kinase 93 329 IPR001245 GO:0004672|GO:0006468
Aed6g1462 371 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 50 352 - -
Aed6g1462 371 CDD STKc_MAP3K-like 97 330 - -
Aed6g1462 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Aed6g1462 371 SUPERFAMILY Protein kinase-like (PK-like) 80 330 IPR011009 -
Aed6g1462 371 PANTHER SERINE-THREONINE PROTEIN KINASE 50 352 - -
Aed6g1462 371 Gene3D Transferase(Phosphotransferase) domain 1 159 360 - -
Aed6g1462 371 SMART serkin_6 90 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1462 Aed-Chr6 18925109 18928090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1462 52 339 MAP Kinase Kinase Kinase AT1G62400 58.900 3.01e-123 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed6g1462 PK_Tyr_Ser-Thr 7.2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1462 - - gmx:100785212 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1462 6 18925109 18928090 Aed6g1462 6 18925109 18928090 ECH
Aed6g1462 6 18925109 18928090 Aed10g0950 10 8210510 8215621 PCT