Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1452 ATGGAAGAAACATTTGTTCCCTTACGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGAATCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTTGCTTCAGCAATTCCAGTTATCTCTTTTGGGGAGCAACTAGAGAGAAACACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATTCATTCAATCTTTGGAGGGCAGCCCCTCCTAATACTTGGCGTGGCCGAGCCAACAGTTCTGATGTATACATTTCTGTATGACTTTGCAAAGGACAGAAAGGATTTGGGACACAAACTGTTCTTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGTGTTGCTCTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCCTTGCAGGTGAACTCTTTGGTCTGCTAATAGCAATGCTCTTTATGCAGCAGGCTATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCTCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTTAGAAGCCGTAAGGCTAGATCATGGCGATATGGGGCAGGATGGTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTTGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCAAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTAATGAAGGAAATGTTGAATGTGCCTCTCCTCTATATTATTGGAGCCTTTATACCGGCAACTATGATTGCCGTTCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCCCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCATCCAATGGTGTGATTCCTCAATCTCCAATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTCTTGCGGAATAAGCTTGTATCTGCTGCACGAAAAAGCATGCAGAAAAATATGAACCTGAGTCAGTTATACCAAAGTATGCAAGAAGCATATGACCAAATGCAAACTCCATTAGCTCACCAAATACCGCCTGCCTCGGGGCTAAAGGAATCCACCATCCAACTGACTTCAAGTCAGGGATACATTGATTCCCCTGTTGACGAGGATGTTTTTGATCTGGATAAGGATGTTGATGACCTTTTGCTGGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTGATGGTTGCAGTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAAATACCAACATCTGTGCTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATACTATATCTTTTCACTGCTCCAAGTCGAAGATATAAAGTGCTGGAGGAACACCATACAGCCTTTATTAAGACCATGCCCTTCAAAACTGTTGCGACCTTTACCTTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTAATCCCAGTACGCCAATATTTCCTTCCCAAGATTTTCAAAGGAGACCATCTTCAAGAGTTGGATGCTGCAGCATACGAGGAAGCACCTACTATTAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGGCAACAGCAGTCAACAATAATAGTGGGGAAATTCTTGACGAAATTATTACAAGGAGATGTGGAGAGATCTGCCTCAACAAAAAATCAAGGAGTTTAACTCCAACATCATGTGGAGACACTATACCGGCTAAAGGAAATATCTCAAAGGATTCACAGCCTAGGATCAATCATGATCATGAAGATGAAGATCAAGAGAAGTACTAG 2067 0.4354 MEETFVPLRGIKNDLKGRLVCYKQDWTSGIQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSIFGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAVLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYSNWTVMKEMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSAARKSMQKNMNLSQLYQSMQEAYDQMQTPLAHQIPPASGLKESTIQLTSSQGYIDSPVDEDVFDLDKDVDDLLLVEVKEQRLSNLLQALMVAVCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEEHHTAFIKTMPFKTVATFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKIFKGDHLQELDAAAYEEAPTISFNLSFEDSGSQATAVNNNSGEILDEIITRRCGEICLNKKSRSLTPTSCGDTIPAKGNISKDSQPRINHDHEDEDQEKY 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1452 688 MobiDBLite consensus disorder prediction 657 688 - -
Aed6g1452 688 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Aed6g1452 688 Pfam HCO3- transporter family 458 549 IPR011531 GO:0006820|GO:0016021
Aed6g1452 688 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Aed6g1452 688 MobiDBLite consensus disorder prediction 657 671 - -
Aed6g1452 688 PANTHER BORON TRANSPORTER 2-RELATED 1 662 - -
Aed6g1452 688 PANTHER ANION EXCHANGE PROTEIN 1 662 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aed6g1452 688 MobiDBLite consensus disorder prediction 672 688 - -
Aed6g1452 688 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1452 Aed-Chr6 18839554 18845245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1452 1 676 Antiporters AT3G62270 73.708 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1452 K24194 - gmx:100815420 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1452 6 18839554 18845245 Aed6g1452 6 18839554 18845245 ECH
Aed6g1452 6 18839554 18845245 Aed10g0936 10 7934705 7940676 PCT