Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1449 ATGCAGAGCACAGTTTTGTCTCTCTATTCTTCCATCTCTCTCCGCAAACCTCACAACACAAACCGCGTCTCTGCTTCTGCTTCCGCTTCGAAACTCAACGTCATTCTCTCTTCTTCCTTCCCATGCCAACCATGTTCTCTCTCTTTCAAACTCGCTCCCTCTCGCCCCTTCCTCCACGTCAGAGCAGCCTCCTCGCCGGAGAGCAGCGCCGGCGAGCTCTCCGGCGGGAACACTCTCCTCAACACTCTGGAACTGGGTGCCCTGTTCGGGTTCTGGATCCTGTTCAACATCTACTTCAACATCTACAACAAACAGGTCTTAAAGGTGTACCATTTCCCTTTAACCGTAAGCACCCTTCAGTTCGCTGCGGGGTCTCTCTTCGTAGCACTCATGTGGGGTTTTAATGTCTTTAAGAGACCTAAACTCAGTGGCGCCCAGCTTGCAGCAATATTGCCACTCGCTGTGGTACATACTTTAGGGAACCTGTTCACTAACATGAGTCTCGGAAAGGTTGCTGTGTCATTCACTCACACGATCAAAGCGATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGACGCCTACTGCATTGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTGGTGCTGGCGTCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAACTTGACTAATCAATCTCGCAATGTTCTTAGCAAAAAGCTCATGGTTAACAAGGAGGAATCTATGGACAACATAACCCTCTTCTCAACAATAACGGTTATGTCCTTCTTGTTATCAGTACCTGTAACTTTGTTAATGGAGGGTGTCAAATTTACCCCTACTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCTCTTCTTGCTGCAGTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCAGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCAGTATCATCAATTAACGCATTGGGGACTGCTATAGCTCTTGCGGGTGTTTTCTTGTATTCCAGAGTGAAGCGAGTTAAGCCAAAGACAATTTAA 1152 0.4696 MQSTVLSLYSSISLRKPHNTNRVSASASASKLNVILSSSFPCQPCSLSFKLAPSRPFLHVRAASSPESSAGELSGGNTLLNTLELGALFGFWILFNIYFNIYNKQVLKVYHFPLTVSTLQFAAGSLFVALMWGFNVFKRPKLSGAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGETPTALVVGSLVPIVGGVVLASATEASFNWAGFWSAMASNLTNQSRNVLSKKLMVNKEESMDNITLFSTITVMSFLLSVPVTLLMEGVKFTPTYLQSAGLNVNEVYIRSLLAAVCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSSINALGTAIALAGVFLYSRVKRVKPKTI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1449 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 218 - -
Aed6g1449 383 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 83 381 IPR004696 GO:0016021|GO:0022857|GO:0055085
Aed6g1449 383 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 12 379 - -
Aed6g1449 383 PANTHER SOLUTE CARRIER FAMILY 35 12 379 - -
Aed6g1449 383 Pfam Triose-phosphate Transporter family 84 373 IPR004853 -
Aed6g1449 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 301 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1449 Aed-Chr6 18822983 18826052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1449 1 381 Antiporters AT5G33320 64.128 2.05e-167 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1449 K15283 - gmx:100780925 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1449 6 18822983 18826052 Aed6g1449 6 18822983 18826052 ECH