Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1431 ATGCCTGTAAATCCATGGACCCTCTTCTTCTTATGCATTTCCCTTGTGCTTCTTCCATTCCATTCTTTCATAGCTGCTGCAGTGAACCAACAAGGGGAGGCTCTTCTGTCATGGAAGAGAACCCTGAATGGATCCTTGGAGGTATTGAGCAACTGGGACCCAGTTCAAGATACCCCATGTAGCTGGTATGGAGTGAGTTGCAACTTCAAGAACCAAGTAGTACAATTGGATCTGAGGTATGTGGATTTGCTTGGAACACTCCCCACTAACTTCACGTCATTGCTTTCCTTAACCAGTTTGATCTTAACCGGAACCAACCTCACTGGTTCAATCCCGAAAGAAATAGGTGAACTACTTGTGGAACTCAGCTACTTGGACTTGAGTGATAATGCCTTGAGTGGCGAAATCCCAAGTGAGCTGTGTTACTTGCCCAAACTCGAGGAACTCCATCTCAACTCCAACGACCTCGTGGGGTCCATTCCAGTTGCACTTGGGAACCTCACCAAGTTGCAGAAGCTGATCCTCTACGACAATCAACTCAGTGGCGAAGTTCCCAGCACCATCGGCAACCTTAAGAGCCTTCAAGTGATAAGAGCCGGCGGAAACAAGAACCTGGAAGGTCCCCTACCACAAGAAATTGGCAACTGTTCCAGTTTAGTGATGTTGGGTCTTGCTGAAACAAGCCTCTCTGGTTCTCTGCCACCAACTCTTGGCCTTTTGAAGAACCTTGAAACCATTGCCATTTACACTTCCTTACTCTCAGGTGAAATACCACCTGAACTTGGGGACTGCACGGGGCTCCAAAACATTTATCTTTACGAGAATTCCCTCACTGGATCCATACCCAGTAAGTTGGGAAACCTTAAGAACCTCGAAAACCTTCTCCTGTGGCAGAACAACCTAGTTGGCACAATCCCTCCGGAGATTGGAAACTGCGAGATGCTGTCAGTGATTGACGTGTCAATGAACTCACTAACCGGAAGCATCCCCAAAGCATTCGGGAACTTGACATCACTGCAAGAGCTCCAACTCAGTGTGAACCAGATTTCAGGTGAGATTCCGGGAGAATTAGGCAAGTGTGAGATACTCACGCATGTAGAACTTGACAACAATCTCATCACTGGCACCATACCTTCCGAATTGGGAAACCTTGCGAATCTAACGCTGTTGTTCTTATGGCACAACAAGCTGCAAGGTAACATTCCCTCTTCACTTTCCAATTGTCAAAACCTAGAGGCTATTGATCTGTCGCAGAATGGATTAACGGGTCCCATACCCAAGGGGATATTCCAGCTCAAGAATCTCAACAAGCTCTTGCTCCTCTCCAACAATCTCTCGGGGAAAATCCCTTCTGAGATTGGGAATTGTTCCTCCCTGATTCGATTCCGAGCCAACGACAACAACATCACCGGGAACATTCCCTCGCAGATTGGGAATCTCAGTAATTTGAATTTCCTAGACCTAGGGAATAATCGGATTTCTGGAGTTATCCCGGAGGAGATCTCCGGCTGCCGGAATCTCGCTTTTCTGGACATGCATTCCAACTTCATCGCCGGAAATTTGCCGGAAAGTTTGAGCCGGCTTAATTCGCTTCAGTTTTTCGATGTATCTGATAACATGATCGAAGGTACACTGAACCCTACCCTAGGCGAACTCGCCGCACTCTCCAAGCTCGTTCTCGCGAAGAATCGAATCTCCGGCCCAATTCCGAGTCAACTCGGTTCTTGTTCCAAGCTACAGTTGCTGGATCTCAGCAGCAACAATATCACCGGCGAAATCCCCGGCAGCATTGGCAACATTCCGGCGCTGGAAATCGCTCTGAATCTCAGCCTGAACCAGCTCTCCGGCGAGATCCCTCAGGAGTTTTCCGGTCTGACGAAGCTCGGCATATTGGACATATCACACAACGTTCTCAGCGGGAACCTGCAGTATCTCGCGGGCCTGCAAAATCTCGTGGCGCTGAACATCTCGTATAACAAATTCTCGGGACGCGTTCCGGACACGCCTTTCTTCGCGAAGCTGCCGCTGAGCGTGCTGGCGGGGAACCCGGCGCTGTGCTTCGCCGGGAACGATTGCAGCGGAGACGGCAGCGGGAGGTCGGGGCGGCGTGCGAGGGTGGCGCGCGTAGCAATGGTGGTTTTGCTGTGCACCGCGTGCGTGCTGCTGATTGCGGCGCTGTACGTGGTGGTCGCAGCGAAAAGACGAGGGGACCGCGAAAGCGACGTGGAGCTTGATGGAAAGGACAGTGACGCGGACATGGCCCCACCCTGGGAAGTGACGCTGTACCAGAAACTCGATCTGTCTATCTCTGACGTAGCGAAATGTCTCTCTGCGGGTAACGTCATCGGCCACGGCCGATCTGGCGTCGTTTACAGGGTCGACTTGCCCGCCACGGGACTCGCCATCGCGGTCAAGAAGTTCCACCTCTCGGAGAAATTCTCCGCGGCGGCGTTCTCGTCGGAGATCGCCACGCTGGCGCGTATCCGTCACCGGAACATCGTGCGGCTGCTGGGCTGGGGGGCCAACAGGAGATCCAAGTTACTGTTCTACGATTATTTACCGAACGGTAATTTGGACACTCTCTTACACGAGGGGTGCACAGGGTTAATCGATTGGGAGACACGGCTCAGGATAGCGCTGGGCGTCGCTGAGGGTCTGGCTTACTTGCACCACGATTGTGTCCCTGCTATCTTGCACCGGGACGTCAAGGCTCTCAACATTTTGTTAGGTGACAGATATGAACCCTGTTTGGCTGATTTCGGTTTCGCTCGCTTCGTCGAAGATGATCACGCTTCCTTTTCCGTTAATCCTCAGTTCGCTGGCTCCTACGGCTACATTGCTCCCGACAAGAAATGTCTCTTAGCTATCTGTCTTGGTTGGATCTTAACATGTGGTGAGAGTATAATGTTTTGTTGGAATCTCGCAGAGTATGCATGCATGCTTAAGATAACAGAGAAGAGCGATGTGTACAGCTTTGGAGTGGTCCTACTGGAGATAATAACGGGGAAAAGGCCAGTGGATCCATCATTCCCGGATGGACAACATGTTATTCAGTGGGTCAGGGAGCACCTCAAGAGCAAGAAGGACCCAATCGAGGTTCTCGATTCCAAGCTACAAGGCCATCCAGACACACAAATACAAGAGATGCTTCAAGCACTTGGTATTGCTCTCTTGTGTACAAGCAATCGTGCAGATGATCGACCCACTATGAAAGATGTTGCTGCATTATTGAGAGAAATTCGTCACGACCCTCCACCAGGTGCTGCTGAGCCCCACAAGCCCAAGCCCAAGCCCGACACAACAGATCAAGCTTCGTCCTATTCCTCCTCCTCTGTTACCCCTGCTCAGTTGCTGCTCCTACAATCTAGTTCACATTCCTCATCATCACTTGCTTATTCCTCTTCCTCAGCAGCAGGCTACCACCCTACAATCTAG 3435 0.5095 MPVNPWTLFFLCISLVLLPFHSFIAAAVNQQGEALLSWKRTLNGSLEVLSNWDPVQDTPCSWYGVSCNFKNQVVQLDLRYVDLLGTLPTNFTSLLSLTSLILTGTNLTGSIPKEIGELLVELSYLDLSDNALSGEIPSELCYLPKLEELHLNSNDLVGSIPVALGNLTKLQKLILYDNQLSGEVPSTIGNLKSLQVIRAGGNKNLEGPLPQEIGNCSSLVMLGLAETSLSGSLPPTLGLLKNLETIAIYTSLLSGEIPPELGDCTGLQNIYLYENSLTGSIPSKLGNLKNLENLLLWQNNLVGTIPPEIGNCEMLSVIDVSMNSLTGSIPKAFGNLTSLQELQLSVNQISGEIPGELGKCEILTHVELDNNLITGTIPSELGNLANLTLLFLWHNKLQGNIPSSLSNCQNLEAIDLSQNGLTGPIPKGIFQLKNLNKLLLLSNNLSGKIPSEIGNCSSLIRFRANDNNITGNIPSQIGNLSNLNFLDLGNNRISGVIPEEISGCRNLAFLDMHSNFIAGNLPESLSRLNSLQFFDVSDNMIEGTLNPTLGELAALSKLVLAKNRISGPIPSQLGSCSKLQLLDLSSNNITGEIPGSIGNIPALEIALNLSLNQLSGEIPQEFSGLTKLGILDISHNVLSGNLQYLAGLQNLVALNISYNKFSGRVPDTPFFAKLPLSVLAGNPALCFAGNDCSGDGSGRSGRRARVARVAMVVLLCTACVLLIAALYVVVAAKRRGDRESDVELDGKDSDADMAPPWEVTLYQKLDLSISDVAKCLSAGNVIGHGRSGVVYRVDLPATGLAIAVKKFHLSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRSKLLFYDYLPNGNLDTLLHEGCTGLIDWETRLRIALGVAEGLAYLHHDCVPAILHRDVKALNILLGDRYEPCLADFGFARFVEDDHASFSVNPQFAGSYGYIAPDKKCLLAICLGWILTCGESIMFCWNLAEYACMLKITEKSDVYSFGVVLLEIITGKRPVDPSFPDGQHVIQWVREHLKSKKDPIEVLDSKLQGHPDTQIQEMLQALGIALLCTSNRADDRPTMKDVAALLREIRHDPPPGAAEPHKPKPKPDTTDQASSYSSSSVTPAQLLLLQSSSHSSSSLAYSSSSAAGYHPTI 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1431 1144 SMART serkin_6 776 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1431 1144 SMART LRR_sd22_2 625 650 - -
Aed6g1431 1144 SMART LRR_sd22_2 119 151 - -
Aed6g1431 1144 SMART LRR_sd22_2 264 290 - -
Aed6g1431 1144 SMART LRR_sd22_2 480 503 - -
Aed6g1431 1144 SMART LRR_sd22_2 384 413 - -
Aed6g1431 1144 SMART LRR_sd22_2 167 193 - -
Aed6g1431 1144 SMART LRR_sd22_2 576 602 - -
Aed6g1431 1144 SMART LRR_typ_2 119 141 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 552 576 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 432 456 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 94 118 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 143 166 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 384 408 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 167 191 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 336 360 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 288 312 IPR003591 -
Aed6g1431 1144 SMART LRR_typ_2 480 504 IPR003591 -
Aed6g1431 1144 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 427 519 IPR032675 -
Aed6g1431 1144 SUPERFAMILY L domain-like 377 691 - -
Aed6g1431 1144 MobiDBLite consensus disorder prediction 1082 1099 - -
Aed6g1431 1144 Pfam Protein kinase domain 779 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1431 1144 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 975 1098 - -
Aed6g1431 1144 PANTHER OS01G0170300 PROTEIN 4 956 - -
Aed6g1431 1144 PANTHER OS01G0170300 PROTEIN 975 1098 - -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 329 426 IPR032675 -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 606 692 IPR032675 -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 520 605 IPR032675 -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 221 328 IPR032675 -
Aed6g1431 1144 SUPERFAMILY Protein kinase-like (PK-like) 771 1112 IPR011009 -
Aed6g1431 1144 Gene3D Transferase(Phosphotransferase) domain 1 853 1086 - -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Aed6g1431 1144 Pfam Protein tyrosine and serine/threonine kinase 968 1075 IPR001245 GO:0004672|GO:0006468
Aed6g1431 1144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Aed6g1431 1144 Gene3D Phosphorylase Kinase; domain 1 757 852 - -
Aed6g1431 1144 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 956 - -
Aed6g1431 1144 ProSiteProfiles Protein kinase domain profile. 776 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1431 1144 ProSitePatterns Protein kinases ATP-binding region signature. 782 806 IPR017441 GO:0005524
Aed6g1431 1144 MobiDBLite consensus disorder prediction 1082 1112 - -
Aed6g1431 1144 SUPERFAMILY RNI-like 76 452 - -
Aed6g1431 1144 Gene3D Ribonuclease Inhibitor 142 220 IPR032675 -
Aed6g1431 1144 Pfam Leucine rich repeat 96 156 IPR001611 GO:0005515
Aed6g1431 1144 Pfam Leucine rich repeat 465 515 IPR001611 GO:0005515
Aed6g1431 1144 Pfam Leucine rich repeat 315 373 IPR001611 GO:0005515
Aed6g1431 1144 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1431 Aed-Chr6 18710626 18715122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1431 27 1115 Receptor kinase-like Gene Family AT5G56040 53.839 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed6g1431 Pkinase 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1431 - - gmx:100778064 1904.41