Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1418 ATGGGTAACCCGAACCCTAGCCCGGAAGAGGAAAAGACCCTCCAGGAGGAGCTTCTGGGTCCCATCTTGCTCGGAGACCGCGTCATAAAGCTCGCCCAGGAGGCGGAGTCCTCGAAGGTGGACTGCACGGAGCTGGCGCGTAAGGTTCAGGTGGTCTGCGACAACCTGCGCTCCGTGGTGCGCGTGGTATCGGGGAGCCAGCAGGTCAACGAGCGCCCCATCCGCCGCATCGTCGGCGAGGTCTACAAAAACCTAGAGCGCACGTTAGCATTCGTCCGCAAGTGCAAGAAGCACGGCGGCGTCCTCCGCCAGGTGTTCTCCATGACCACCACCGCCGATTTCCGCAAAGTCTGGAACCTTCTGGAATCTTCCAACGGCGACATGGTGTGGCTCCTCACCATCCTTGACTCCAAAGAGGGCTCCAATGTTTCCCTTCCACCCATCGCCAGCAACGACCCTATCCTCGCTTGGGTCTGGACCTACACCTACACTCTCCAATTGGGCCAGCCCAAAGACCGCGCCGAAGCCGCCACTGAACTCGGTTCACTCGCCAGAGACAACGACCGCAATAAATTCATCATCTTAGAGGAAGGTGGTGTGCTTCCCCTCCTCAAGCTTCTCAAGGAAGCTTCTTCCCCCGATGCTCAGGTCGCTGCTGCCGATGCTCTTTTCAACATTACAACCAATCAAGACAGGGTCGTGAGTTCCATCGTGGAATCCCATGCTGTCCCCACCATTGTTCAGGTTCTCGGTGATTCCCCCATGAGGGTTCGTCTCTCCGTTGCCAATTTGGTCTCTGCTATGGCCGACCAACACGAACTTGCTCGTGAGGAGTTCGTCAGGGCCAATGTCACTAGGCCCCTTGTGTCCCTTCTGTCCATGGATATGGGCACTGTCCTCACCAATCCCGTCGTTGGTCGCGCCACCATTCACACGCTTGTTCTCAATCTGTCCAACGTTGGGGAGGCGAATTCGGATGGGAGTAGCCGTGGCGGCTCTGGCCAAAATCAAAGAGAGGTTGAGAGCCTGGAGTTGAGGAATGAAGTCAAAGTCAGCTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTCAAGCTGCAGGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCCAAGATTATTGAGTCCGAGAGTGGCGAATTGCAGCTGAATTGTCTTATGGCTGTCATGGAGATTGCTGCTGTGGCCGAGTCCAATGCTGATCTTAGAAGAGGTGCTTTCAAGCGAACTGCACCAGCTGCAAAGGCAGTTCTGGACCAGCTTTTGAGGGTGGTTCAGGAGGAGACAGATCCGGCATTGCAGATTCCTGCTATTAAGGCACTTGGTTCCATGGCCAGAAACTTCTCTGGGAAGGTTCCGCAAGTTCTTGGTCCTTTAGTTGCTCAGCTTGGCAACAGAGATGTTGATGTGGCCAGTGAGGCTGCCATTGCTTTGGGGAAGTTTGTGTGCCTGGAAAACTACAACCGTGTTGACCATTCCAAGGCAATACTTGAGCTTGATGGGATTCCTAAGCTAATGACCCTGCTGCAGATCAATGATCGCCAACAAGTTCATGGCTTGAAATTACTTTGTAACCTTGCCTTAAATGTAGGTAACAGCAAGGTCCTTGAGCAAGAATGTGCCTTGAATACCCTGGAGCGGTTTGCTCGTCCTGTTCAAGCACAACATCCTGATATGAAGGACCTTTTTGCAAATGCCATACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACAGGCAGCCCTTGGGGCTTAAGCATGAAGCCATGAACATCTTCCATTGTTTTGTGAAAGCATTGTACATTATCACTGATGACAAAAGTGGACCTGAGGATATCTTGGAATGTTCTGAGAGGCCATCCAATGAACCGGATTTTGTTGTTGGTTGTAACATAGTAATCAGATCGAAGAGGACGGATGAGTTAATGAGAGCAGTGGAGACCACTCTAAATTCCCATTTGCTTCACCACTTCTTGTTGTACAGCCCCTGTCACTGA 2031 0.5214 MGNPNPSPEEEKTLQEELLGPILLGDRVIKLAQEAESSKVDCTELARKVQVVCDNLRSVVRVVSGSQQVNERPIRRIVGEVYKNLERTLAFVRKCKKHGGVLRQVFSMTTTADFRKVWNLLESSNGDMVWLLTILDSKEGSNVSLPPIASNDPILAWVWTYTYTLQLGQPKDRAEAATELGSLARDNDRNKFIILEEGGVLPLLKLLKEASSPDAQVAAADALFNITTNQDRVVSSIVESHAVPTIVQVLGDSPMRVRLSVANLVSAMADQHELAREEFVRANVTRPLVSLLSMDMGTVLTNPVVGRATIHTLVLNLSNVGEANSDGSSRGGSGQNQREVESLELRNEVKVSCAKALWKLSKGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRGAFKRTAPAAKAVLDQLLRVVQEETDPALQIPAIKALGSMARNFSGKVPQVLGPLVAQLGNRDVDVASEAAIALGKFVCLENYNRVDHSKAILELDGIPKLMTLLQINDRQQVHGLKLLCNLALNVGNSKVLEQECALNTLERFARPVQAQHPDMKDLFANAIHHLTLYQPGAQLHRQPLGLKHEAMNIFHCFVKALYIITDDKSGPEDILECSERPSNEPDFVVGCNIVIRSKRTDELMRAVETTLNSHLLHHFLLYSPCH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1418 676 Gene3D - 18 133 IPR036537 GO:0007166
Aed6g1418 676 PANTHER ARMADILLO REPEAT ONLY 4 9 594 - -
Aed6g1418 676 SUPERFAMILY ARM repeat 169 585 IPR016024 -
Aed6g1418 676 Pfam Armadillo/beta-catenin-like repeat 187 227 IPR000225 GO:0005515
Aed6g1418 676 Gene3D - 334 619 IPR011989 -
Aed6g1418 676 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 198 231 IPR000225 GO:0005515
Aed6g1418 676 SMART arm_5 186 228 IPR000225 GO:0005515
Aed6g1418 676 SMART arm_5 499 538 IPR000225 GO:0005515
Aed6g1418 676 SMART arm_5 229 270 IPR000225 GO:0005515
Aed6g1418 676 Gene3D - 164 325 IPR011989 -
Aed6g1418 676 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 9 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1418 Aed-Chr6 18605489 18609496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1418 141 262 U-box Gene Family AT3G46510 33.065 9.19e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1418 - - gmx:100813824 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1418 6 18605489 18609496 Aed6g1418 6 18605489 18609496 ECH
Aed6g1418 6 18605489 18609496 Aed10g0894 10 7486089 7491829 PCT