Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1411 ATGGAATCCAAACCCGTAGATATTATTAAGTTCCTCTATAGCTACGGCGGCAAGATCCTTCCTCGCCACACCGATGGCAAGCTCCGATACCACGGCGGCCACACCAGAGTTCTCGCCCTCCATCCTTCCACCTCTTTCTCAGAGCTGATGCTAAAGCTTAGCGAGTTGTGCGGTTCGCCGGTCACACTTAAGTGTCCATTGCCGAACGGAGAATTGGACACCTTGATTTCCGTCACCAGCGACGAAGATTTGGCCAATATAATCCACTTATACGATCGAGCTTCTTCGTCGCTACCTCATCGCTTGAAGATCAGAGCCATTCTTTCGCCGCCCAAGAAATCGTCTTCTCCGTCCGGTTCGCCTCACTCCTCCGCCGATTCCCTGCCGTGCTCGGCGGCGCACCGGCTCGTTCGCCGGAACTGCTCGCCTTTGCCGGTTGCGTATCCAAGTGGCGTCCGTAACGGAGAGGCGAAAGGCTGTTGGTACACGAGGCAGTTGGACGGAAGCCCGAGATTCCTTTACCGTGGGGCTCATTGGAATAATTATTGCCATTGA 555 0.5459 MESKPVDIIKFLYSYGGKILPRHTDGKLRYHGGHTRVLALHPSTSFSELMLKLSELCGSPVTLKCPLPNGELDTLISVTSDEDLANIIHLYDRASSSLPHRLKIRAILSPPKKSSSPSGSPHSSADSLPCSAAHRLVRRNCSPLPVAYPSGVRNGEAKGCWYTRQLDGSPRFLYRGAHWNNYCH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1411 184 MobiDBLite consensus disorder prediction 109 128 - -
Aed6g1411 184 PANTHER OS05G0427100 PROTEIN-RELATED 1 184 - -
Aed6g1411 184 SMART PB1_new 23 109 IPR000270 GO:0005515
Aed6g1411 184 PANTHER PB1 DOMAIN PROTEIN 1 184 - -
Aed6g1411 184 Pfam PB1 domain 25 102 IPR000270 GO:0005515
Aed6g1411 184 CDD PB1_UP2 14 108 - -
Aed6g1411 184 Gene3D - 27 107 - -
Aed6g1411 184 SUPERFAMILY CAD & PB1 domains 25 116 - -
Aed6g1411 184 MobiDBLite consensus disorder prediction 111 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1411 Aed-Chr6 18567694 18569219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1411 7 115 MAP Kinase Kinase Kinase AT1G04700 44.954 4.32e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1411 - - gsj:114393520 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1411 6 18567694 18569219 Aed6g1411 6 18567694 18569219 ECH
Aed6g1411 6 18567694 18569219 Aed10g0892 10 7455920 7458398 PCT